| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5348 |
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| Symbol | |
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| ID | 1042144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6096877 |
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| End bp | 6097839 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637148747 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_747449 |
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| Protein GI | 26992024 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0041705 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAAGT CCTTGATGCG TATGACATTG CGTCAACTCC AGATCTTTAA CGAGGTGTGC
GATTTGCGGT CGTACAGCCG TGCTGCGGAG GAGATGGCGC TGACGCAACC CGCCGTTAGT
CTACAGATCC GCCAGCTTGA AGAGCTGATT GGCCAGCCAT TGTTCGAGTA CGTGGGCAAG
AAGCTCTACC TGACCGAGGC GGCCGAGGCC CTGCAGCGCG CCAGCCACGA TATCTTCGGG
CGCCTGGAGA GCCTGGACAT GCAGCTGTCG GACATGCAGG GCTCACTGCA GGGTCAGTTG
AAACTGGCGA TCGAGTCCAG TGCCAAGTAC TTCGTGCCAC ACCTGTTCGC CGCCTTCAAG
CAGCGTCACC CGGAAGTCAA CCTGACCCTG ACGGTGGTCA ATCGTGCCCA AGCCATCCGC
CGTCTTTCCG ATAACCGCGA CGACCTGATC ATCATGTCGA TGGTGCCGCA AGACATGGGC
CTGGAGTTTC TGCCGTTCCT CAACAACCCG ATCGTTGCGG TTGCGCCGCC ACAGCACCCG
CTGTGCAAGC TGGAGCAGTT GCGCATGCAG GACCTGGAGC CTCATACCCT GCTGGTCCGC
GAGCAAGGTT CGGGAACACG CAAGGCGTGC GAAGAGTACT TCAAGGACAA GCGCGTGCAT
TTCGCCCAGA CGCTTGAAGT AGCCTCGGCC GATGCCCAGC GCGAATGCGT GATCGCCGGG
CTGGGGATCG CCCTGTTGAC CCGTCACGCC GTCAACCTGG AATTGGCTAC CGGGATGCTG
AAGGAATTAC CGGTCGAGGA GCTACCGCTG TACCGTAGCT GGTGCGTGGT GCAGGCCAAG
GCCAAGCGGC AGTCACCGGT GGCCTTGGCG TTTCTTGCAT TCATACGCGG CGAACGTGCT
CTTATCAGCG CGCTTGTTGA ACGTTTTTCG GGGAAGTTGC CGCCGACGAC TGCCATACCG
TGA
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| Protein sequence | MRKSLMRMTL RQLQIFNEVC DLRSYSRAAE EMALTQPAVS LQIRQLEELI GQPLFEYVGK
KLYLTEAAEA LQRASHDIFG RLESLDMQLS DMQGSLQGQL KLAIESSAKY FVPHLFAAFK
QRHPEVNLTL TVVNRAQAIR RLSDNRDDLI IMSMVPQDMG LEFLPFLNNP IVAVAPPQHP
LCKLEQLRMQ DLEPHTLLVR EQGSGTRKAC EEYFKDKRVH FAQTLEVASA DAQRECVIAG
LGIALLTRHA VNLELATGML KELPVEELPL YRSWCVVQAK AKRQSPVALA FLAFIRGERA
LISALVERFS GKLPPTTAIP
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