| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5080 |
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| Symbol | pilQ |
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| ID | 1041901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5801586 |
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| End bp | 5802848 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637148479 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | NP_747181 |
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| Protein GI | 26991756 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT GGATGAAATA CCTGTTGGCG ACCCTGCTGT CGATCCCGCT GGCTTCGGCG
ACGCCTTACC AGGGTGAACC CCTGTCGCTG AACTTCCAGG ATGTTGAGGT GCGTGCGGTG
CTGCAGGTGC TGGCTGACTA CGCTGGCGTC AACCTGGTCG CCAGTGATGC GGTACAAGGC
AGTGTCACTT TGCGTTTGCA GGACGTGCCG TGGGATCAGG CGCTTGACCT GGTCCTGCGC
AGCAAGGGCC TGTCCCGGCG CCAGGAGGGC AATGTGCTGT TGGTGGCACC TGCAGCCGAG
TTTGCCGCGC AATCAGCAGA CGCCCGGGTG AGTCAGGCGC TGGATGCGCA CCTGCAGCCA
TTGCGTCGGG AGCTGCTGCC CATTCACCAC GCCAAGGCCG CCGATCTGGC GCAGTTGCTG
CTGGCAGGCC TGGAGGGTGA CGGCATCCCT CCGGCTAGCT TGAGTGTCGA TGAGCGCACC
AACACGTTGG TGGTGCATCT GCCCGCTGAC CGCCTGGCCG AGATGCGCCA GCTGGTGGCG
CAGTTGGATG TGCCGGTGCG CCAGGTAGCG ATCGAGGCGC GTATCGTCGA GGCCAACGTC
GATTATGAGA AAAGCCTGGG GGTACGCTGG GGTGGGCCGC TGTACGGCGA GAAACTGCGG
CCCGGCAAGG AGCTGTTCGT CGACCTCGGT CTGGAGCGTG CCGGCAGCAG TATCGGCCTG
GGTTTGTTGC GCGGTGACGT GCTGCTGGAC CTGGAGCTCA GTGCCATGGA AAAAAGCGGC
AACGGCGAAA TCATTTCGCA GCCCAAGGTG GTCACGGCTG ACAAGGAAAC GGCGAGGATC
CTCAAGGGTA CCGAGGTGCC TTACCAGGAA ACGAGCCAAA GCGGCGCTAC CTCGGTATCG
TTTCGCGAAG CCTCGCTGTC GCTGGAAGTA ACGCCACAGA TCACCCCGGA CAACAAGGTG
ATCATGACCG TCAGGGTGAC CAAGGACGAG CCGGATTACG TCAATGCCTT GAACAACGTA
CCGCCGATTC GCAAGAACGA GGTCAATGCC AAGGTTCGTG TGGCTGACGG CGAAACGATC
GTGATCGGTG GCGTCTACTC GACTTCGCAA AACAATGTGG TCGACAAGGT GCCATTTTTC
GGCGATCTGC CGTATGTTGG GCGGCTGTTT CGACGCGATG CATTACAAGA GAAAAAATCC
GAGCTGCTGG TCTTCCTGAC TCCGCGTATC ATGAGTGACC AGGCGATTGC TGTGAGTCGT
TGA
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| Protein sequence | MKTWMKYLLA TLLSIPLASA TPYQGEPLSL NFQDVEVRAV LQVLADYAGV NLVASDAVQG
SVTLRLQDVP WDQALDLVLR SKGLSRRQEG NVLLVAPAAE FAAQSADARV SQALDAHLQP
LRRELLPIHH AKAADLAQLL LAGLEGDGIP PASLSVDERT NTLVVHLPAD RLAEMRQLVA
QLDVPVRQVA IEARIVEANV DYEKSLGVRW GGPLYGEKLR PGKELFVDLG LERAGSSIGL
GLLRGDVLLD LELSAMEKSG NGEIISQPKV VTADKETARI LKGTEVPYQE TSQSGATSVS
FREASLSLEV TPQITPDNKV IMTVRVTKDE PDYVNALNNV PPIRKNEVNA KVRVADGETI
VIGGVYSTSQ NNVVDKVPFF GDLPYVGRLF RRDALQEKKS ELLVFLTPRI MSDQAIAVSR
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