Gene PP_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4955 
Symbol 
ID1043889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5646845 
End bp5647582 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID637148356 
Producthypothetical protein 
Protein accessionNP_747058 
Protein GI26991633 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCAC TGCTTTGTGT TCTGGGATTG CTGGCAACGA TGCTGGCAAC ACCTGCCCCG 
GGTCACGCCA AGCTACGCCT GGTGGCCGAT AGCTGGCCAC CGTTCACCGA TGCCAAGATG
CCGGGCGGTG GCCTTGCGAC CAGCATCGTT ACCACGGCAC TGGCGCGTGC CGGCTACGCC
AGCGGCTATG AAGAGGTGCC GTGGGCGCGT GCGTTGCTGG GGGTAGGTGA AGGGCGCTAC
GACGTGCTGA TCAATGCCTG GTACAACGAC TCGCGCGCCA ATATCGGGCA ATTCTCCAGC
GCCTACCTGA GTAATCGTAT TCGCCTGCTG CAGCGTAAGG GCGAGGCGTT TAGCTACAAG
CGTCTGTCTG ACCTTTATGC CTATAGCATT GCCGTAGTGC GTGATTACGC CTATTCACCG
GAATTCGACG GGGATCCCCG TCTGCACAAA GTGCCGGTGC GCAACTTTTC TTCTGCGGTA
CGCATGTTGG CGGCAGGGCG GGTAAGCCTG GCGGTGGAAG ACGAGTACGT GGCCCGCTAC
AACCTGCAGC GTGAGCCGCA GGACGTGCGT GATGGGGTGA TGCTGGTGGA TCCGCCGCTG
GGGGAGAACA CCCTGCATAT TCTGGTCAGC CTGAAGCACC CGGAGCATGA TCGGATCGTC
GAGCGCTTCG AGCAGGCGAT AGCGGCGATG AAGGCCGATG GCAGCTATGC CCGGCTGCTG
CGTCAGTACG GCTTTTGA
 
Protein sequence
MRPLLCVLGL LATMLATPAP GHAKLRLVAD SWPPFTDAKM PGGGLATSIV TTALARAGYA 
SGYEEVPWAR ALLGVGEGRY DVLINAWYND SRANIGQFSS AYLSNRIRLL QRKGEAFSYK
RLSDLYAYSI AVVRDYAYSP EFDGDPRLHK VPVRNFSSAV RMLAAGRVSL AVEDEYVARY
NLQREPQDVR DGVMLVDPPL GENTLHILVS LKHPEHDRIV ERFEQAIAAM KADGSYARLL
RQYGF