| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4376 |
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| Symbol | fliD |
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| ID | 1042463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4966317 |
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| End bp | 4967675 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637147772 |
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| Product | flagellar cap protein FliD |
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| Protein accession | NP_746490 |
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| Protein GI | 26991065 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTA CAACAGTCAG TGGTATCGGC TCCGGCGTCG ATACCCAGTC GATTGTCAAG
GCTCTGGCCG ATGCCGAAAA GGCGCCCAAG CAACAGCAGA TCACTACTCA ACAGAAGACT
ACGACCACAC AAGTGTCTGC TGTGGGCATG ATTAAGAATG CATTGGATAC CTTCCGCTCT
GCGATTGCCA AGCTGAATAC ATCCACGTCT TTCACAGGGC TTGCGGGTAC GTCTTCGGAT
GAAAAAGTCG CCAAGGCAAC CGTGACCGCG TCCGCTTCTG CGGGTAACTA CGCGTTGGAA
GTCACTCAGC TCGCCACTTC TTCGAAGATC ACCACGGATG TTTTTGCTGG AGGAGTTTCT
TCCGTCGTAA ACAATAGCGG TGATCCCCAG ACCTTGACCA TTTCCCAGTC CTCTGCGGAC
TACAATGTCA CGATCCCGGA TGGGGCGACC TTGCAACAGG TTCGCGACCT GATCAATAAA
CAACTGGGCT CACAAGGCAT CAATGCCAAC ATCCTGACGG ATGCCAAGGG TTCACGGCTG
GTAATGAGTT CTTCGACGAC TGGAGAAGGT TCCGATATTA CTTTGAGCGG TGACTCCTCC
CTCGTCCAGA ATGCCACGCC CGGCGCGCCG GCTCAAAATG CAAAATACAC GATTGACGGC
CTGGAGCTTG AATCCAAGAG TAATACGGTT ACTGGCGCCA TCAGTGGCGT CAACTTCGAG
TTACTAGCTG AGGGTAAGTC AAGGCTCAGC GTTGCGACCA ATACCACTAC GCTGAAAACC
TCTGTGCAAT CTTTTGTCAG TGCGTACAAC GCCCTGATCA CGGCAATCAA CACGCAGACC
AAAGTCACGG CCACTGGCGA TGCCAGCACT ACCACCGCCG GTGCGTTGAC CGGGGATGCA
ACGATGCGCG CTTTGGTCTC GACAGTGCGT AACGAGCTGG TGAAGAGCAC CGGGGCGGGG
AGCATCTCCA TGCTTTCGCA GATGGGGATC AATACCGATC AGCAGACGGG CCTGTTGGTG
CTGGACGATA CCAAGTGGGA CAAGGCTGTT GCCAAGGGTG CAGCCGATAT CGCGGCGGTG
TTCACCGGTG ACAAGGGCCT GATCAAGCGC ATGACTGCGG CCACGGATGC TTACACTGGC
ACGACCGGAA TCTTGGCAAC GCGGACAAAG AACCTCAACG ACAACCTAAC TGAGCTCACC
AAGCAGCAAG AGGCGCTTGA TCGTCGTATT GAGACATTGA CGGCCACGCT GACAGCCAAA
TACAACGCGA TGGATACCCT CGTCGCCAAG CTCAATGCCA CGAGTTCGAG CGTGATGACG
ACCCTGAACG CGATGAACAA GGCCAATAAC GACGACTGA
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| Protein sequence | MASTTVSGIG SGVDTQSIVK ALADAEKAPK QQQITTQQKT TTTQVSAVGM IKNALDTFRS
AIAKLNTSTS FTGLAGTSSD EKVAKATVTA SASAGNYALE VTQLATSSKI TTDVFAGGVS
SVVNNSGDPQ TLTISQSSAD YNVTIPDGAT LQQVRDLINK QLGSQGINAN ILTDAKGSRL
VMSSSTTGEG SDITLSGDSS LVQNATPGAP AQNAKYTIDG LELESKSNTV TGAISGVNFE
LLAEGKSRLS VATNTTTLKT SVQSFVSAYN ALITAINTQT KVTATGDAST TTAGALTGDA
TMRALVSTVR NELVKSTGAG SISMLSQMGI NTDQQTGLLV LDDTKWDKAV AKGAADIAAV
FTGDKGLIKR MTAATDAYTG TTGILATRTK NLNDNLTELT KQQEALDRRI ETLTATLTAK
YNAMDTLVAK LNATSSSVMT TLNAMNKANN DD
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