Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3717 |
Symbol | |
ID | 1046299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4239386 |
End bp | 4240285 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147128 |
Product | LuxR family transcriptional regulator |
Protein accession | NP_745850 |
Protein GI | 26990425 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.314676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGG CGCAAAGGGC TGTGCGCGGG CGTGCCTGGC AGGCTAGACT GCCGGGCATG ACCCAGGCCT CTCCCGATAC CCCGCTTACC CTCACAATGG GCGCGCTGCA GCAGTGGCAC GTGGCGTTGC AGCGCGCCCT GGCCCATGGT GAAACCCCCG AGGCGCTGGA GTATGTGGCC GCTGCCATCG GCCAGTTGGT GCAGGTGGAG TCGATGATGA TCAGCCTTGA GTGCCAGGGG CGGGCGCCGC AGTTGCTGTA CCAGCAAGGC ATCCCCGAAC GGCATCGGGC CGCGGTGCTG GAGCGCTATT TCAGCGCCGG CTACCTGCTG GACCCTTTCT GCCTTGCCGT GCAAAGCGGC CTGGCCGAAG GCTTCTACCA CCTGCAGGAA ATCGCCCCCG ACAACTTCTT CGACAGCGAC TACTACAAGG CCTATTACCT GGGTACAGGT TGCAGTGAAG ACAGCTACTA CATCGTCGAC ATCAGCGCAG GCCGCAAGCT GTCGCTGAGC CTGTTCCAGG GCTGCAGCGG CACGCGCCTG AACGCCGGGC AGGTCGACCT GTTGCGTGCG CTGGAGCCGA TGGTGCGCGA ACTGCTGGGG CGTTATGCCC GACACAACCT GGAACCGGGC GCTGCATCAA CCGAGCGCGG CAGCCTGCAG GCAGCGTTCG ACAGCTTCGG CTGCCAGGTG CTGACCGACC GCGAACGGGA AGTGGCGCAC ATGATCCTGC GCGGGCACTC GGTGAAATCT ACCGCGCTGG AGTTGGGTAT TTCGCCGGAG ACCGTGCGCA TGCACCGCAA GAACCTGTAC ATGAAGCTTG AGATCAACTC GCAATCGGAG TTGTTTGCAC GGTTTATCGA CTGGTTACGC GGTGATCATT TGCCGATGAT TTTAGATTGA
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Protein sequence | MNLAQRAVRG RAWQARLPGM TQASPDTPLT LTMGALQQWH VALQRALAHG ETPEALEYVA AAIGQLVQVE SMMISLECQG RAPQLLYQQG IPERHRAAVL ERYFSAGYLL DPFCLAVQSG LAEGFYHLQE IAPDNFFDSD YYKAYYLGTG CSEDSYYIVD ISAGRKLSLS LFQGCSGTRL NAGQVDLLRA LEPMVRELLG RYARHNLEPG AASTERGSLQ AAFDSFGCQV LTDREREVAH MILRGHSVKS TALELGISPE TVRMHRKNLY MKLEINSQSE LFARFIDWLR GDHLPMILD
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