Gene PP_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3555 
Symbol 
ID1045590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4032360 
End bp4033367 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content65% 
IMG OID637146970 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_745692 
Protein GI26990267 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.170441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG ACCGCCTCAA TCCCAACCCA GACGATGCCA TCACCGACGC CGCAGCGCAT 
TGGTGCATGC GCCTTCACGC CGAAGATTGC ACGCAGGCCG AGCGTGAAGC ATTCGCTGAC
TGGTTGGCGG CCGACCCGCG GCATGCCGAA GAATATCAGG CGATGCTGGA AATCTGGCAA
ACCGCCGACC TGCTCCCGCG CAGCGCCACC GTCATCGACT TCAACCCACC CGCCAGACAC
GCCGCCCGCC CTCGCAACTG GCGGCCGCTG GCGTCTGCTG CGGCCATCGC CCTGGCGGTG
CTGCCGCTGG CCGGCTGGAT GGGGTGGGAA CAGGGCTGGT TGCCCAACCA CTATCAGCAC
TTCGAAGCCG GTGACCGCAT GCAGACCGTG GAGCTCAGCG ACGGCAGCAC GGTACAGCTC
AACCTCCACA CCGAACTCAC CTTCCTCAAC TACAAGGACC AACGCCAGGT CACGCTCAAG
CGCGGCGAGG CGTTCTTCAA GGTGCGACAC GACAGCAGCC ACCCGTTCAT CGTGCGTGCC
GGCAGTGGCC AGACCCGGGT CACCGGCACC CAGTTCAACG TGTGGAAGTA CCAGGACCAG
GTGAAGGTCA CCCTGGTGGA AGGTTCAGTG CTGGTGTCCA GTGAGGGCAG TGCCGGTGGC
TACCGCCTTG GCCCTGGCAT GCAGGCCAGC TACCACAAGG GCGACTTCGA GCCGCAGCTG
GAGCAAAGCG ACGACTATGG CAACAGCCTG GCATGGCGCA GCGGCAAGCT GGTGCTCGAC
AACCTGAGCC TGGAACAGGC GCTGCCGGTG ATCAACCGCT ACCTCGACGC CCCGCTGCTA
CTGGCCGATG CCAGCACCGG CCGCATTCGC ATCAGCGGCA TCTACAACAC CCGGGAAGTG
GGGCGCCTGG TCAACAACCT GCCCAAAGTC CTGCCGGTCT ACCTGACCCG CAGCAAGGAC
GGCAGCACCG TGCTCAATCG CATCTCGCCG CCGCCCGGCA AGGGCTGA
 
Protein sequence
MNHDRLNPNP DDAITDAAAH WCMRLHAEDC TQAEREAFAD WLAADPRHAE EYQAMLEIWQ 
TADLLPRSAT VIDFNPPARH AARPRNWRPL ASAAAIALAV LPLAGWMGWE QGWLPNHYQH
FEAGDRMQTV ELSDGSTVQL NLHTELTFLN YKDQRQVTLK RGEAFFKVRH DSSHPFIVRA
GSGQTRVTGT QFNVWKYQDQ VKVTLVEGSV LVSSEGSAGG YRLGPGMQAS YHKGDFEPQL
EQSDDYGNSL AWRSGKLVLD NLSLEQALPV INRYLDAPLL LADASTGRIR ISGIYNTREV
GRLVNNLPKV LPVYLTRSKD GSTVLNRISP PPGKG