Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3555 |
Symbol | |
ID | 1045590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4032360 |
End bp | 4033367 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146970 |
Product | anti-FecI sigma factor, FecR |
Protein accession | NP_745692 |
Protein GI | 26990267 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.170441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACG ACCGCCTCAA TCCCAACCCA GACGATGCCA TCACCGACGC CGCAGCGCAT TGGTGCATGC GCCTTCACGC CGAAGATTGC ACGCAGGCCG AGCGTGAAGC ATTCGCTGAC TGGTTGGCGG CCGACCCGCG GCATGCCGAA GAATATCAGG CGATGCTGGA AATCTGGCAA ACCGCCGACC TGCTCCCGCG CAGCGCCACC GTCATCGACT TCAACCCACC CGCCAGACAC GCCGCCCGCC CTCGCAACTG GCGGCCGCTG GCGTCTGCTG CGGCCATCGC CCTGGCGGTG CTGCCGCTGG CCGGCTGGAT GGGGTGGGAA CAGGGCTGGT TGCCCAACCA CTATCAGCAC TTCGAAGCCG GTGACCGCAT GCAGACCGTG GAGCTCAGCG ACGGCAGCAC GGTACAGCTC AACCTCCACA CCGAACTCAC CTTCCTCAAC TACAAGGACC AACGCCAGGT CACGCTCAAG CGCGGCGAGG CGTTCTTCAA GGTGCGACAC GACAGCAGCC ACCCGTTCAT CGTGCGTGCC GGCAGTGGCC AGACCCGGGT CACCGGCACC CAGTTCAACG TGTGGAAGTA CCAGGACCAG GTGAAGGTCA CCCTGGTGGA AGGTTCAGTG CTGGTGTCCA GTGAGGGCAG TGCCGGTGGC TACCGCCTTG GCCCTGGCAT GCAGGCCAGC TACCACAAGG GCGACTTCGA GCCGCAGCTG GAGCAAAGCG ACGACTATGG CAACAGCCTG GCATGGCGCA GCGGCAAGCT GGTGCTCGAC AACCTGAGCC TGGAACAGGC GCTGCCGGTG ATCAACCGCT ACCTCGACGC CCCGCTGCTA CTGGCCGATG CCAGCACCGG CCGCATTCGC ATCAGCGGCA TCTACAACAC CCGGGAAGTG GGGCGCCTGG TCAACAACCT GCCCAAAGTC CTGCCGGTCT ACCTGACCCG CAGCAAGGAC GGCAGCACCG TGCTCAATCG CATCTCGCCG CCGCCCGGCA AGGGCTGA
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Protein sequence | MNHDRLNPNP DDAITDAAAH WCMRLHAEDC TQAEREAFAD WLAADPRHAE EYQAMLEIWQ TADLLPRSAT VIDFNPPARH AARPRNWRPL ASAAAIALAV LPLAGWMGWE QGWLPNHYQH FEAGDRMQTV ELSDGSTVQL NLHTELTFLN YKDQRQVTLK RGEAFFKVRH DSSHPFIVRA GSGQTRVTGT QFNVWKYQDQ VKVTLVEGSV LVSSEGSAGG YRLGPGMQAS YHKGDFEPQL EQSDDYGNSL AWRSGKLVLD NLSLEQALPV INRYLDAPLL LADASTGRIR ISGIYNTREV GRLVNNLPKV LPVYLTRSKD GSTVLNRISP PPGKG
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