Gene PP_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3475 
Symbol 
ID1046430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3940666 
End bp3941196 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID637146890 
Producthypothetical protein 
Protein accessionNP_745612 
Protein GI26990187 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.870698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGCAG CCTCTTCGCT GAATGGTAAG GCCAACGGCG GCTTTACATA CCTGGGGGTG 
CTGCTGCTGA TTGCGGTCAG CAGCGTGGCC CTGGCGGCCA CCGGCACGAT CTGGGCGAGC
GCCGCCCAGC GCGACCGCGA ACGCCAGTTG CTGTGGGTCG GCAGCCAGTA TGCCCAAGCC
TTGCGCAGCT ACTACCGCGC CTCGCCAGGG CTGGCCCAGT ACCCCCAGGA TCTGGCCGAC
CTGCTACAGG ACAACCGCTA CCCGCAGGCC AAACGGCACA TTCGCAGGCT TTACCCTGAC
CCGATCAGCA ACAGCCACGA ATGGGGCCTG CTGCGCTCGA TCGATGGCCG TATCACCGGA
GTGTACAGCC GTTCGGACGC CACCCCTTTC AAGCGCAGTG GCTTCAGCGC CGAATGGAGC
GGGTTCGAGG GGATGGAGCA CTACAGCGAC TGGCAGTTCG TCGCCGAGCA GGCCTTTACC
GAAAGTGCAC GCGGTGTGCA GACGAATGCA GGCCCGGGAG ACACACCATG A
 
Protein sequence
MMAASSLNGK ANGGFTYLGV LLLIAVSSVA LAATGTIWAS AAQRDRERQL LWVGSQYAQA 
LRSYYRASPG LAQYPQDLAD LLQDNRYPQA KRHIRRLYPD PISNSHEWGL LRSIDGRITG
VYSRSDATPF KRSGFSAEWS GFEGMEHYSD WQFVAEQAFT ESARGVQTNA GPGDTP