Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3023 |
Symbol | |
ID | 1043158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3409505 |
End bp | 3409939 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146445 |
Product | amino acid efflux protein, putative |
Protein accession | NP_745167 |
Protein GI | 26989742 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0879148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGCAG GGCCCGGAAC CCACCGAAAT AGAGGGCTGT TGTCAGAGGA AACGAGAATG GACCTTTCAA GCCTGCTGCT TTTCATCCCT GCCTGCTTCG CCTTGAACAT GGCGCCAGGG CCTAACAACC TGTTGTCACT GCACAACGCC AGCCGTTACG GCCTGCGCAC CGCCTGCGTG GCCGGCGCCG GCCGTATCCT TGCCTTCTGC GGCATGATCG CCCTGGCAGC GATGGGCCTG GCAGTGGTGT TGCATACCAG CGAATACCTA TTCCTGGCCA TCAAGGTGGT GGGCGCGGCC TACCTGTTCT ACATCGCCTG GCAACTGTGG CGCGCACCCG TGAGCGAGAC CGTGGTGGCA AGCGATCACC CAGGCGGCAC TTGGCGCCTG GCGCGCCAGG AGTTCTGGGT GGCGGCCGGC AACCCTAGCG ACTGA
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Protein sequence | MTAGPGTHRN RGLLSEETRM DLSSLLLFIP ACFALNMAPG PNNLLSLHNA SRYGLRTACV AGAGRILAFC GMIALAAMGL AVVLHTSEYL FLAIKVVGAA YLFYIAWQLW RAPVSETVVA SDHPGGTWRL ARQEFWVAAG NPSD
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