| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2865 |
|---|
| Symbol | |
|---|
| ID | 1042779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3266491 |
|---|
| End bp | 3267393 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637146287 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_745009 |
|---|
| Protein GI | 26989584 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACC TTAACGACCT CTTCTACTTC GCGCGTGTCG TCGAAGCCGG CGGATTTGCC
GCCGCCGGGC GCCAGCTGGG CATCCCCAAG TCGCGCCTGT CGCGGCGTAT CGCTGAGCTT
GAAGAGCGCC TGGGCACACG CCTGTTGCAG CGCACCACAC GGCAACTCAA GCTCACCGCA
GTAGGTGAAC GTTACTTGCA TCATTGCCAG GCCATGTTGC TGGAGGCCGA AGCCGCCGAC
GAGACCGTGG CCAGCATGAG CAGTGAGCCG CGCGGGCGTT TACGGGTATC GTGCCCGGTG
GCACTGGCAC ACGCCTTCCT GCCGGATGTG ATCAGCCGCT TTCTCGAGCA GTACCCGCTG
GTGCAACTGG ACATGGTATT GCTCAACCGC CGGGTCGACC TGATTTCCGA AGGCATTGAT
GTGGCGTTGC GCGTACGCGA CCTGGGCGAC GAAGACCCGG CCCTGGTCAC CCGCCGCCTG
CGCCAGGCGC AAATGCAACT GGTGGCCGCA CCCGGTTTTG CCGACCACAT TCGCGAACCG
GGCGAGTTGG CATCATTGCC CGTACTGGGC GCAGCCGAAG CAGACCGGCT GGTACACTTC
CGCCTGTTCG GCCCCCATGG CAAACAGCAG GAAATAGCGC TGGAGCCACG CTTGGCGATC
GACGATTTCG TAGTACGTAA CGCTGCTGTA CGTGCCGGCC TGGGGTTCAC TGCGCTGCCC
AGCATGTTCT GTGAAGAGGA ACTGGAACGC GGCGAACTGG TGCGCCTGCT GCCAGACTGG
TCGCTGCCGG GTGGCTACCT GCAGGCCGTT TACCCACACA GGCGCGGCCT GCTGCCTGCG
GTCCGGGTGT GGATCGACCA CCTGGCGGCG TCATTCGAGG CTTGTGGAGA GCGGTATGTC
TGA
|
|---|
| Protein sequence | MQDLNDLFYF ARVVEAGGFA AAGRQLGIPK SRLSRRIAEL EERLGTRLLQ RTTRQLKLTA
VGERYLHHCQ AMLLEAEAAD ETVASMSSEP RGRLRVSCPV ALAHAFLPDV ISRFLEQYPL
VQLDMVLLNR RVDLISEGID VALRVRDLGD EDPALVTRRL RQAQMQLVAA PGFADHIREP
GELASLPVLG AAEADRLVHF RLFGPHGKQQ EIALEPRLAI DDFVVRNAAV RAGLGFTALP
SMFCEEELER GELVRLLPDW SLPGGYLQAV YPHRRGLLPA VRVWIDHLAA SFEACGERYV
|
|---|
| |