| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2287 |
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| Symbol | 16 |
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| ID | 1045197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2611059 |
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| End bp | 2615768 |
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| Gene Length | 4710 bp |
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| Protein Length | 1569 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145709 |
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| Product | phage internal core protein |
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| Protein accession | NP_744436 |
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| Protein GI | 26989011 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.120406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAA TTTCTCTGGA AGATGCCCGG AAAATCACTG ATTCGACCGA GCAGCAATAT
GGCCTCCCTC AAGGAACGCT GTTCAAAATG AGCGGTGAGG AATCATCGTT CAACCTCGAT
GCCGAAAGCG GCAAGGGCGC CGAAGGTCCG TTCCAACTGA TGCCCGCCAC TCAAAAGGCA
TACGGCGTCA CTGACCCCCA CGACTACACC CAGGCCGCTG ATGCCGCTGG GCGCTACATG
CGGGACAGCC TGGCTAAGTA CAACGGCAAC ATGGATATGG CCCTGGCCGA CTACAACGGC
GGTCCTCGGG CTGCCAAGGC GCTGGCCGCA GGGAGTCCCT GGCCGGAAAC ACGGGACTAC
CTGAGCAAGT TCAACGGCAC CACCTCCGCA GCAGGGCAGA CCCCCTCGGC AAAGCCTGAC
CCCCTGTCCT CCGCTTTCAC CTCCGGCGAT TCGGTCAACC CGGATCAGAG CGCTTCCGCC
TCGGACCTGG TGCAGATGCA GGCCCAGCAG CGGGCAGAGA ACGGGGGGCT CATCAACAAC
GTAGAGAATA TCCCCCAAGC TCTGGCCCTG GGCTTCGCCT CGGACAACTC CGTGGTGAAC
TGGTGGCGGG ACAGGGGCAC CCAATCGACG GACTGGAATT TCTCCTGGGA CAACGACAAG
GCTGGCAAGT ATCTGGAGGG CATTCCCGAG AAGAACTGGG ACTACATCCT CCAGGCCACA
AGTGACTCCG ATGCTGACTT CCGGCGATCC CGTATGCAGC AGTCCATGCA GGATGAGCAG
AAGCTGTCTG AAATGGGAGT CGCAGGCTTC GGGGGCCGTT TAGTCGGCGG GCTGATGGAT
TTGCCCACGC TCATCGGATT TGTCCCCGGT ATGGGTGGCG AAGGCTTACT CACGGCTGGC
TCACGGATTG CCAACGCAGT CCGCATGGGC GTGGTCGGGG CTGGGACCAA CGTGGGCTAT
GACGCGCTGA TGAACCGATA CAACCCGCTC CGCACGGATG ACGACCTGTA CATCTCCGCT
GCGATGGGCC TGGGCCTCGG GGCCATTGGC GGTAGCCTCG CTCACGTAGA GGGGCCGCTG
GCTGAGGAAA ACGCCCGCCT GGCCCAGTGG GGCCGCCAGG AGTCCAGCGG GGCGCAAATC
AAGGAGCTTA CCGATTCGGG CCTCATGCGC CCCGGTGAAG GCGCGCTGAG CCAGCCTGAG
TTTCTCCGCA GGTTCGGCCA GGACGTGGAC ACGAAGAACA CCCCTGGCAA CGCCATTATC
TGGCGGACTG AGGACGGAGG CTCCACCCGC ATCCACTCGC CGGGTGAGGA ACCCAAGACC
GTGGACTTGC CGCCCGAGGA GCCACGGGCA CCAGAGGAAC CACCGGCAGC GGGTGAGCCA
CGGGATGAGC CGCAGGAACC GTCAGTGGGT ACACCGGGGC GCAAGCAGCC TTGGAGCGAA
GAGTGGGACA CCCCCCGCTA CGAAGCCAGT GGCGGCCGGG ATGACAACCT GATCCTCCCC
AGTGGCGTCA ACCGCGTGAG CCAGTTGGCC GATTACGTCC GGGCGTACTC AAAGAACCCC
GAGACGGTCA AAGTGCTGAA CCGTGTCCTC AAGGCTGTGG ACCTCCGCAA GATGAACTTC
AAGGTCATCG AAAAGGGCCA GAAGTTTGGC AATGCGGCGA TGGACGCGGT GATTAAAACT
GCTAAGGGCG CGGTTCTCAC CCCGCACCAG TCCACCGGGG ATGGCATTCA AATGTTCCTC
CGGGGCCATT CCTACATGAG CCCCACCGGG CGTCTGTCGG ACCTGTCCGG CCTGAATGAA
GAAACCTTCG TGCATGAGCT GGTCCACGCA GCCACCGTGT ACAAGATGCA CGCCACCAGC
GACCGCCTGA TGTCCACGGA CCCGCAGATC AGCAAGGCCA CCACGGACCT CAGCACGCTG
CACGGCTCGA TGCTTAAGGC TGCGCAGAGT GAGTTCGGGG AACACTGGAA GAGCGCTCTG
GAGGGTCGCC TGAGGGTTAA CCTGGACAAC CCCAAGGAGA TGATCGCCTA CGGACTGACT
AATGCCCGGT TCCAGCAGTG GCTCAAGGGG AAGGCCCTTC TAGGCAAGCC CGATGCTTCC
TTGTGGGACC GCTTTGTCGG TGGCCTTCGA AAGTTGCTAG GAATCGGCAA AAACGAACAC
AACGCCCTGT CCCGCCTGGT GGAGCTGGCG AACCCACTTA CCCGCCCAGG AGGCGTGTCC
AGGACGGTGC GGAGTCCCGC ATTGGAAGGC AGCGTGGATG CTCAGGCCGC GAAGGCTGCG
CACATCCCAG AAGTGTTCGG CTGGGGCCTC GGCCTGGAAA ACAAGCTTGG CAAAGCTGAC
TTTCCAACCG CAGTCCGTGC GCTGGCCGCC AAGCTCTTCG GCACGTCCAT TGGCTACAAG
GACCATTCCG TGGTCGGGCC CAATGCCTGG GACGACACCA CGAAGTGGGC AGAGGGCTGG
GCCACGCAGA TGAAGAAAAC CTCGCTCCCG CAGTTCCAGA AGTGGTTCCA GGCCAACGGC
TTTAAGTGGC ACCAGAAGGC TGAGGCATTT GACCACTTCG GTAGCCTGGT GTCGGACTTC
ATCCGGGGCC GGGATGCTGA CTTCCCTGAT GAGGTAGTGC GTGCTGGTGA GACCGTCCGA
AAGACCCTGG ACCATGTGGC GGACTACATC AACAACCCGC TCAAGGATGA AGGGCGGATC
AAGCTGGGCC TGACTGAAAC GGAAATCCGT GACTCCGACA CGGGCGCTAC CTCCGTGGTC
GGCACCCTGG AAAAGAACCC GAACTACCTC CCGCGAAAGC ATGACGTGAA CAAGTGGAAC
TCCATGGTCA ACACCTGGGG CCATGAAGCT GTCACCGGCT GGTGGGCTAG GGCGTATCAG
GGAGCCCGTG AGGGCATCTC GGATGAGGCC GCCAACCGCT GGGCGAAGTG GTACGTTCGG
ACTGTCGAAG AGGCCCATGC GAACCGCACG CAGGACGCGA TGGGTTCCAT GATGATGGGC
ACCGACCGGG AAGCCTTGAA GCACTCGCTG ATGCTCAATG GCGGTTACTC CGAAGAGGAG
GCCGTCCGGG TCATGGACGA TATGCTGCCC ACGAAGGGGA CTGATGCGGG GCGTACTGCC
TCAAGCCTCA AGAACCGGAA CTCCGTGAAC GAGCTGCACA CCGAGACCTG GACAGGTAGC
GATGGGACGA AGAGCGCTGT GTCCCTCAAC GACTTCATCC ATACCAACGC CTTCGAAGTA
GTGGAACCGT ACCTGCGCCG TATGGCAGGG AGCGTGGCCC TTGCAAAGCA CCTGGACGTG
TACAAGGGGC AGGACATCGA AAAGGCCATC ATGGCCGCCA CTGAGAACAA GTTCGGGGAA
GGGATGCGCC CAGGCGCGAA CTTGGCCGGT ATGCGAAAGG ACTTGAAGTT CGCCTTCGAC
CGCATCCAGG GCCTCCCGAT GGAGGAGTTC TCCACGCTCA ACAAGAGCCT GGAAATGTGG
CGGAACTTCA ACGTCATCCG CCTCATGGGC GGGGCGGTAT GGAACCAAGT CTCCGAGCTA
TCGCAGATCA CTGGGTCCAT GGGATGGAAG GCCGCGCTCC AGGCCGTGCC CACTCTCCGC
GCATTGCGCC GTGACATCGC CACCGGCAAA GCCCCGGATG ACCTCCTGGA CCACCTGGAG
AACACAATCG GAGGTGCCGG GGCTGACTAC GTGGCCCGCC TGAATTTCAG CGCCAAGGAC
GATTGGGTCC GCCATAACGG TGACACCGCG TTCAACCGCA AGCTGGATGC CGTGGACAAT
GGGCTACGCA AGGTCGCCAA AGGCGTCCTG GATTACACCG GCATGACACC GCTAATGATC
CAGCAGAAGC GCATCCACGC TATCGCCCTG GTGAATCACT GGGTCAATCA CGCCAATGGT
GCGGCGTCCA AGCTCCTCAC CGATGACCGA CTGGCCTGGA TGGGGATGAG CAGAGAGCAA
GCGAACGGCG TTCTGGCGGA CCTCAAGAAG TACAGCACTC CCCGGAAGGG TGCCTTCGGG
CCTTCCCATA AGCTGGACTT CGGGGCCTGG GTTAAGGACT CCCCTGAGAA CTACTCCAGG
TTCATGACTG CGATGCACCG TGAGTCTCGC CGTGTCATCC AGGAGAACGA CCTTAGCTCC
ATGATTCCAC TCATGGGGAC CACACTAGGA AAAGCCATGT TCCAGTTCAT GGCCTTCACC
ATGCACGGCT GGAACAAGTC CATGCTCTTC GCCGCGAACC ACCGGGACTG GGCCACGTTG
TCCACTGTCC TGCACGGGGG ATTCCTGGCG AGCCTGACCT ACATGGGCCG AACCATGCTG
GATTCCATGG GGATGAATGA GGAGAACCGC CAGAAGTTCC TGGACCAGCG TATGGCCCCC
GGCCAGATCG TGGCCAACAG CTTCGGCAAA ATTTCTCAGG CTTCTCTTCT GCCAAACCTC
TATGACACGG TGTCTCCGTA CCCGCTGTTC TCGGGGATGC GGACCACCAG CGACCTGTCC
AGCTTTGTCT CCAACCCAAC CTATCAGGCC ATCAACGGCC TCATCTCCAT GAAGAAGCTC
GTCAAGAACG GGCTCTCTGA TGACTCCCAA ACGTCCGCTT CGGACATCAA GAACTGGGCT
CGCCTCCTGC CGCTGAACAA CGTAGCGCCC GTTAGCACCA TGTTGAACAT GATCGCCAAC
GACTACCCAA CCGGCTCGAA GCAGCACTGA
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| Protein sequence | MTQISLEDAR KITDSTEQQY GLPQGTLFKM SGEESSFNLD AESGKGAEGP FQLMPATQKA
YGVTDPHDYT QAADAAGRYM RDSLAKYNGN MDMALADYNG GPRAAKALAA GSPWPETRDY
LSKFNGTTSA AGQTPSAKPD PLSSAFTSGD SVNPDQSASA SDLVQMQAQQ RAENGGLINN
VENIPQALAL GFASDNSVVN WWRDRGTQST DWNFSWDNDK AGKYLEGIPE KNWDYILQAT
SDSDADFRRS RMQQSMQDEQ KLSEMGVAGF GGRLVGGLMD LPTLIGFVPG MGGEGLLTAG
SRIANAVRMG VVGAGTNVGY DALMNRYNPL RTDDDLYISA AMGLGLGAIG GSLAHVEGPL
AEENARLAQW GRQESSGAQI KELTDSGLMR PGEGALSQPE FLRRFGQDVD TKNTPGNAII
WRTEDGGSTR IHSPGEEPKT VDLPPEEPRA PEEPPAAGEP RDEPQEPSVG TPGRKQPWSE
EWDTPRYEAS GGRDDNLILP SGVNRVSQLA DYVRAYSKNP ETVKVLNRVL KAVDLRKMNF
KVIEKGQKFG NAAMDAVIKT AKGAVLTPHQ STGDGIQMFL RGHSYMSPTG RLSDLSGLNE
ETFVHELVHA ATVYKMHATS DRLMSTDPQI SKATTDLSTL HGSMLKAAQS EFGEHWKSAL
EGRLRVNLDN PKEMIAYGLT NARFQQWLKG KALLGKPDAS LWDRFVGGLR KLLGIGKNEH
NALSRLVELA NPLTRPGGVS RTVRSPALEG SVDAQAAKAA HIPEVFGWGL GLENKLGKAD
FPTAVRALAA KLFGTSIGYK DHSVVGPNAW DDTTKWAEGW ATQMKKTSLP QFQKWFQANG
FKWHQKAEAF DHFGSLVSDF IRGRDADFPD EVVRAGETVR KTLDHVADYI NNPLKDEGRI
KLGLTETEIR DSDTGATSVV GTLEKNPNYL PRKHDVNKWN SMVNTWGHEA VTGWWARAYQ
GAREGISDEA ANRWAKWYVR TVEEAHANRT QDAMGSMMMG TDREALKHSL MLNGGYSEEE
AVRVMDDMLP TKGTDAGRTA SSLKNRNSVN ELHTETWTGS DGTKSAVSLN DFIHTNAFEV
VEPYLRRMAG SVALAKHLDV YKGQDIEKAI MAATENKFGE GMRPGANLAG MRKDLKFAFD
RIQGLPMEEF STLNKSLEMW RNFNVIRLMG GAVWNQVSEL SQITGSMGWK AALQAVPTLR
ALRRDIATGK APDDLLDHLE NTIGGAGADY VARLNFSAKD DWVRHNGDTA FNRKLDAVDN
GLRKVAKGVL DYTGMTPLMI QQKRIHAIAL VNHWVNHANG AASKLLTDDR LAWMGMSREQ
ANGVLADLKK YSTPRKGAFG PSHKLDFGAW VKDSPENYSR FMTAMHRESR RVIQENDLSS
MIPLMGTTLG KAMFQFMAFT MHGWNKSMLF AANHRDWATL STVLHGGFLA SLTYMGRTML
DSMGMNEENR QKFLDQRMAP GQIVANSFGK ISQASLLPNL YDTVSPYPLF SGMRTTSDLS
SFVSNPTYQA INGLISMKKL VKNGLSDDSQ TSASDIKNWA RLLPLNNVAP VSTMLNMIAN
DYPTGSKQH
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