| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1885 |
|---|
| Symbol | |
|---|
| ID | 1043205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2118847 |
|---|
| End bp | 2121201 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637145293 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744040 |
|---|
| Protein GI | 26988615 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.157419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACCA ATTACCTCTC GGTCATCACG ACCTGGATGA AGCATAACCA CAAGCACCTG
AACTGGGACC TGACGTTCGC CACGCGTCCC GAGGCCATCA ATGACCTGCT CGCGTTGGCA
CATTGCAGCC AACCAGACAG TGCCTTGGGC GATATCGAAG GTGAGATCGC CATGCCCGAT
TCCGATGTCA CCCACATTCT GACGGGCTAC CGCATGGGGC CGCCCGCACT GGTGGATATG
CAAGCGAACT ACACGTCGCC CAAGGTCCGG CAAAGCCTGG CATTGGAAGG CGGCAGCCAT
CTGGTCATGG ACAAGACCGA CGGGTTGCTC AGCCTGTCGG TTCATGACCT CCTCGACCCG
TTGCCGGTCA CTCAGACAGT GCCGCTGAGC GCCGATGCCC AGGGCGTGAG CGCCGACCTG
CGTGAAGGCA CGGACACCGA GCTGGACCTG GGCGGTGGTT TGCCACAGCG GCAGGCCGCC
GGGCGATTCT TCAAGGAGGT GCTCAGCGGA TTGGGCAGCG CCCGGCAGGT CTATCCCTTG
GCGGACTTCA AGGCGCTGTC TGGCAACCCC TACCTGGCGG TTCGGCACAG TGAAGTACGC
ACCCACGTCA GCAAAGCCGA CGGCAAGTCC GCACTGGTGA TATTCGCGGG TATCAACAAT
GGCTCTGTGG GCAACCTGCC CGCTGAGCAG TCCGATTACC CGTTCCTGCT CCCCGATGAT
CTTGCGCAAC CGGTCGACAG CGCACTGTTG CTGACGTCGC GCTTCCTGCA CCGTGCAGCT
TACGCCACGG GCCTGGCGCA GATGCTCGAG GGAGGCGCGT TCGAGGCTCA GTTCGATGAA
GACAATAACC TGCAGCGGCT GAATGCCACG GCCGGCCTGT TGGAGGTGTA CCCCAGCACT
TATGAGAGCG ACAAGTATCA GTTTGCCTGC GAGGGTTTCA AAATTGCCGT GGACGCAGGG
GCCCCGGCCA GCGATCAGGC GCGGGCTGCC CTGGCGGATT TTCAGCCCCT TCTGAGTGTC
ACCTTTGAAC ACGATGAGGT CCGCCAGCAC TGGAAGTCCC ATTGCACGCT GACCTTCACC
TACAAGCCCA AGCCAACAGG TCCCCTGTAC AGCCGAACCG CAACGTTCCA GTTCGACCTG
CAAACGGTGT TCACCCTGAA TGCACCTGCA TCACCTGAGG AAAGCGCTGG TTGTATGTTG
CTAGGGCAGG TTTTGTGGCC GTGGCAGGCG GCCGAAGTGA CGGAAGTCAG TGGCCTGCCC
AGCGACACGC CATCGGACCT GCGAGAGGAG ATTTATGCGT TTGTCGCCTT CCTGGTCAAG
CAGGCGGTAC TTGAAGGGTT GGCCAGGGAG TTGACGGCGA TGATCCCGGA ACAGGTGATG
GCCGGTCTGT CGCTGGCAGA TGGCAAGCGC CTTGTACCGT TCGACTTCCA GTTACCCGAT
GGAATGGCCG TGTTCGCCAG CGGCTACGGC ACGGCCGGCA TGCGCATCGT CGATCGCCCC
GTGACGCTGG CACCCGGGCA GCGGCATACG TTCAGCGTTG AACCGCCGCG TGAAGGGCTG
ACATGGTCCC TGGAGGCTTT GCCAGGCACT GTCGGTGATC TGGGGCGCAT CGACCCCGCC
AGCGGTGAAT ACCGGGCACC GCCTGCGCAC GCCATGGCGG GGAAACCCGT GCGGGTCCGG
ATCATCGCCA CCGACCCGGG TACCAGCAAG CAGGCCATCA GCATGGCCTC TGTGGCGCCC
GCGACATTGA CGGTCAATCC ACTGATCCGG GTCTGCTACT TCGACGACAC ACTGACCCTC
ACGGCGGGTG CGCAGACCGG AGACCTCGAC TGGTCTGTGG TCGATGATGG CGAAGAAGGA
CGGGGCTCGG TCGTCGCTGA GGGCGATGGC AGGCGTTGCA CCTATACCGC AGGCAGTAAG
GTGGATGCCA ACGTGGCCTA CGTGCTCGAT CAGGTCAGGG TACAGAACCG GGAGACCAGC
GAGTCGCGTT CAATCTATGT GCTGGTACGC CAGCGGCGGC CTGAACTGGT GATCGACGTC
AAGCAGTTGC CCGATGGCGA CCTGCAGTTG ACAGGTATGT TCGATGGGGT AGGCCAGCCA
GACACCCAGT GGGCATTGCC AATTGCAGGG ACTGGCGAGA TCGATGAGGC CACTGGCCGC
TATTCCCCTG CATCTGCCGA CGCCGATGCG CGTTTCGCGC TGATTACCGC CAAATGGGCG
ATTCCAGGTT CTGTCTTCAT CCTGGAAGGT CACCTCATTC TGCCGCTGCC CCTTTCCTTG
CACTTCGACG CTGCACGGCG CGCTGCCAGC CCGACAGGCC TGCGTGTGGC CACATCACCA
TCCATTGGAG GTTGA
|
|---|
| Protein sequence | MPTNYLSVIT TWMKHNHKHL NWDLTFATRP EAINDLLALA HCSQPDSALG DIEGEIAMPD
SDVTHILTGY RMGPPALVDM QANYTSPKVR QSLALEGGSH LVMDKTDGLL SLSVHDLLDP
LPVTQTVPLS ADAQGVSADL REGTDTELDL GGGLPQRQAA GRFFKEVLSG LGSARQVYPL
ADFKALSGNP YLAVRHSEVR THVSKADGKS ALVIFAGINN GSVGNLPAEQ SDYPFLLPDD
LAQPVDSALL LTSRFLHRAA YATGLAQMLE GGAFEAQFDE DNNLQRLNAT AGLLEVYPST
YESDKYQFAC EGFKIAVDAG APASDQARAA LADFQPLLSV TFEHDEVRQH WKSHCTLTFT
YKPKPTGPLY SRTATFQFDL QTVFTLNAPA SPEESAGCML LGQVLWPWQA AEVTEVSGLP
SDTPSDLREE IYAFVAFLVK QAVLEGLARE LTAMIPEQVM AGLSLADGKR LVPFDFQLPD
GMAVFASGYG TAGMRIVDRP VTLAPGQRHT FSVEPPREGL TWSLEALPGT VGDLGRIDPA
SGEYRAPPAH AMAGKPVRVR IIATDPGTSK QAISMASVAP ATLTVNPLIR VCYFDDTLTL
TAGAQTGDLD WSVVDDGEEG RGSVVAEGDG RRCTYTAGSK VDANVAYVLD QVRVQNRETS
ESRSIYVLVR QRRPELVIDV KQLPDGDLQL TGMFDGVGQP DTQWALPIAG TGEIDEATGR
YSPASADADA RFALITAKWA IPGSVFILEG HLILPLPLSL HFDAARRAAS PTGLRVATSP
SIGG
|
|---|
| |