| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0379 |
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| Symbol | pqqB |
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| ID | 1044089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 458942 |
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| End bp | 459853 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637143758 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | NP_742546 |
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| Protein GI | 26987121 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.767126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACATCC AGGTTCTCGG CTCCGCCGCC GGTGGCGGGT TCCCGCAGTG GAACTGCAAC
TGCGTCAACT GCAAGGGCTA CCGTGATGGC ACCCTGAAAG CCACGGCGCG CACCCAGTCA
TCCATCGCCC TGTCCGACGA CGGTGTGCAC TGGATATTGT GCAATGCCTC GCCCGACATC
CGCGCCCAAC TGCAGGCCTT TGCGCCGATG CAGCCGGCCC GGGCACTGCG CGACACCGGT
ATCAACGCCA TCGTCCTGCT GGACAGCCAG ATCGACCACA CCACCGGCCT GCTCAGCCTG
CGCGAAGGCT GCCCGCATCA GGTGTGGTGC ACGGACATGG TCCACCAGGA CCTGACCACC
GGTTTCCCGC TGTTCAACAT GCTCAGCCAC TGGAACGGTG GCCTGCAGTG GAACCGTATC
GAGCTGGAAG GCAGCTTCGT GATCGACGCC TGCCCCAACC TCAAGTTCAC TCCCTTCCCC
CTGCGCAGCG CCGCGCCGCC TTATTCGCCA CACCGCTTCG ACCCGCACCC GGGCGATAAC
CTTGGTTTGA TGGTCGAAGA CACCCGCACC GGCGGCAAGC TGTTCTACGC CCCGGGCCTG
GGCCAGGTAG ACGAAAAGCT GCTGGCGATG ATGCACGGTG CCGACTGCCT GCTGGTCGAC
GGCACCCTGT GGGAAGACGA CGAAATGCAG CGCCGTGGCG TGGGCACCCG CACCGGCCGC
GAGATGGGTC ACCTGGCCCA GAACGGCCCT GGCGGCATGC TGGAAGTGCT CGACGGCTTC
CCGCGCCAGC GCAAGGTACT TATCCACATC AACAACACCA ACCCGATTCT CGATGAAAAC
TCCCCCGAGC GCGCCGAAGT CCTGCGCCGG GGCGTCGAAG TTGCCTTCGA TGGCATGAGC
ATCGAGTTGT AA
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| Protein sequence | MYIQVLGSAA GGGFPQWNCN CVNCKGYRDG TLKATARTQS SIALSDDGVH WILCNASPDI
RAQLQAFAPM QPARALRDTG INAIVLLDSQ IDHTTGLLSL REGCPHQVWC TDMVHQDLTT
GFPLFNMLSH WNGGLQWNRI ELEGSFVIDA CPNLKFTPFP LRSAAPPYSP HRFDPHPGDN
LGLMVEDTRT GGKLFYAPGL GQVDEKLLAM MHGADCLLVD GTLWEDDEMQ RRGVGTRTGR
EMGHLAQNGP GGMLEVLDGF PRQRKVLIHI NNTNPILDEN SPERAEVLRR GVEVAFDGMS
IEL
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