| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1060 |
|---|
| Symbol | |
|---|
| ID | 3765863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 971275 |
|---|
| End bp | 972846 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637797584 |
|---|
| Product | ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_397555 |
|---|
| Protein GI | 78779443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.543795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA AAGTTCTTTT AACAGTATTT TTTATTTTAA TTTCTTTTTT ACAGAACTCT
TGTGGTTCAA AAAAAATATC CCAAAAAATC ATAGTAGCGA GTTCTGGGAA AATCGAATCT
TTAGATCCAG CTAGAGCAAA TACTCTCAAA GCAATTCAAT TAATCAGTTC CCTGGGAGAC
ACATTATATG AATTAAATTC TGACGGAGAA TTAATACCTG AATTAGCAGC AGGGATGCCA
ATTATTTCAA AGGATAGACT TCAAATAATA ATCAATCTAA GAAGAAATGT TTTTTTTCAT
GATGGAACTT CATTTAACTC AAATGCAATA AAGTTTACTT TTGATAGATT TAAAAGAATT
GGAACAATTA ACTATATTTT AGGAAATAAG ATTAAATCTA TAGAAACTCC AAGCGAATAT
TCAGTTAAAA TAAATTTAAA TAAACCATCA AGTTCTTTAA ATGGTTTACT TACATCAGTA
AATTTAACAC CAATATCTCC AACATTTTAT AAAGAATATT CTGATAAGTT TCTAAATGAA
AAATTCGTTG GTACTGGTAA GTATGTCTTG ACCAGTTTTT CTAATGAAGT TCAATTAATT
GATCCAAATT TGAATTATTG GGGTGAAAAG CCCTTAAATA ATGGTATTAA TTTTGTGGGA
TACTCTAATT CATCTTCTCT TTTTGGAGCT TTAAAAAGTA AACAAATTGA CGTACTCTTA
TCAAATTCAA TTGATGATAG TCAGAGAAAT AGTTTAAGTA ATCTAAGCAA AAATAAAAAG
TTTAAAGAAG GTAATAGTCC TTTCACCGAA TTAAGTTTTA TAAGCCTTAG AACTAGTTCT
TATCCATTAA ATAATCTTAA TTTAAGAATG GCTTTAGCAA AAAGTCTTAA TAGAAAATTA
ATTAGTGAAA AAGTAAGTTA TGGTTTGAGA AAGCCATCAA GATCAATAAT TCCTCCGATA
TTAAAAAATG ATAATCAAGG TCTGTGGCCT AAATATAATT ATTTAGAAGC GAGAAAGTTA
TTGCAAAAAG AAACTTATTG CAATGGAAAT ATACTGAAAA TTCCACTTAC ATATAGAACG
AATGTACCAG CAGATAAACT TATTGCCCTC ACTTGGCAAG AAGAAATAAA AAATGTTTTG
AATGATTGCA TTGAGATAGA ACTTAATGGC GTTGAATCTA CAACCGTTTA TAAAAATCTA
AGTTTGGGAA TTTATACAGC AGTTATTCTT GATTGGACTG GTGCTTATTC CGATCCAGAA
GCTTATCTCA CTCCACTTTT AAGTTGTAAT GAAATAGTTG ATGGCATATG TAAAAAAGGT
GAATCAGTTT ATAGTGGTAG TTTTTGGGGA TCTAATAAAG TGGAAAGTTT ATTCCTAAAG
AGTGAAAATA TAAGTGGTAA TAAAAGACTC GACAAACTAC TGGAAATTGA AAAAATAGCA
GCAAATTCAA TCCCTTACAT TCCTATTTGG ATATCCTCTC AAAAAGCATG GTCTCAAAAT
AAAATATCAA ATCCTATTTT TAATGGTGCA GGGATTATTA GATTAAGCGA TCTTGAGTTA
ATTCATGAGT AG
|
|---|
| Protein sequence | MKKKVLLTVF FILISFLQNS CGSKKISQKI IVASSGKIES LDPARANTLK AIQLISSLGD
TLYELNSDGE LIPELAAGMP IISKDRLQII INLRRNVFFH DGTSFNSNAI KFTFDRFKRI
GTINYILGNK IKSIETPSEY SVKINLNKPS SSLNGLLTSV NLTPISPTFY KEYSDKFLNE
KFVGTGKYVL TSFSNEVQLI DPNLNYWGEK PLNNGINFVG YSNSSSLFGA LKSKQIDVLL
SNSIDDSQRN SLSNLSKNKK FKEGNSPFTE LSFISLRTSS YPLNNLNLRM ALAKSLNRKL
ISEKVSYGLR KPSRSIIPPI LKNDNQGLWP KYNYLEARKL LQKETYCNGN ILKIPLTYRT
NVPADKLIAL TWQEEIKNVL NDCIEIELNG VESTTVYKNL SLGIYTAVIL DWTGAYSDPE
AYLTPLLSCN EIVDGICKKG ESVYSGSFWG SNKVESLFLK SENISGNKRL DKLLEIEKIA
ANSIPYIPIW ISSQKAWSQN KISNPIFNGA GIIRLSDLEL IHE
|
|---|
| |