Gene PMT9312_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0472 
Symbol 
ID3765269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp443174 
End bp444373 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content38% 
IMG OID637796990 
ProductCPA1 family Na+/H+ antiporter 
Protein accessionYP_396969 
Protein GI78778857 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0494569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTG AAAGGCTTGG ATTACTTTGG GGAATAACTG TATTCGCAGG TGCTTGTGCT 
CGATTATTTT CTTCTTTTAC AGGATTCCCA AGTGTTGTTA TTTTGTTGCT TTCTGGATTA
TTCATCGGAA GATCAGGTTT AGGACTGGTT GAGCCTTTAG ATCTCGGACA AGGGCTAGAA
ACTATTGTAG GGCTTTTAGT CTGTTTGGTT TTATTTGAAG GGGGATTAAA TTTAAAATTG
CCTGAGGGGA ATATAAGAAA TACTGTTTTA AAAATCTCAT TGGTAAGACT TTTTATTTCA
TTATCAGCTG GAATTTTTAT TGCTCATTGG CTAGCAGGCC TTTCATGGCA AGTCGCAGGA
ATATATAGTG CAATAGTTCT AGCTACTGGC CCCACAGTGG TTTCTCCATT AGTTGAACAA
ATAAAATTAG CTTCCCCTCT TTCAGAAGTT TTAAAAGCTG AGGGGTTGTT ACTTGAACCA
ATTGGTGCAG TATTAGCACT ATTACTTTTA GAACTAACTT TAGGGGACCT ACGTGGGATT
AACGATGTAT TTATTGCATT AATGCAAAGA TTAGGGGGAG GAGTTCTAAT CGGATTAACT
GCGGGATGGT TACTATCAGA AATTTTAAAA AAAATAAAAA ATGAAGCCTC ATTTGGCATA
GAGCTTCAAG TTACCCTTGG ATTTATTTTC CTTGTGTATG GAATTTGTGA ATATTTTTTG
CCAGAATCAG GCTTGCCTGC TTCTGTCGCA GCAGGTTTTA TTGTGGGCAA AAGAGAAGTA
ATAGATAAGG ATAGATTGGA TAATTTAATA GGTGAATTAG CTCAATTAGC AATTACAGTT
CTTTTCCCTC TTTTGGCAGC TGATGTTTCT TGGAGTGAAT TAAGTCCGCT AGGTTGGGGA
GGGGTTATTT GCGTTTTTAT GTTGATGGTC ATTGTTCGTC CTATCTCTAT CTGGATAGCA
ACAATGGGAA GAGAATTAGA CTTAAAAGAA AAAGTATTTT TAGCCTGGTT AGCCCCAAGA
GGTATTGTTA CTGCAGCTGT AGCCTCTCTT TTTTCTATCA GATTAGAACA GGCTGGCATC
CTTGGAGCTG GACGTCTTCA AGGTTTAGTG TTTCTTACTA TATTAATGAC GGTAGGAATC
CAAGGCCTTA CAGCTAAACC TTTGGTAAAT CGGCTTGAAT TAGGCCAAAA AAAAAATTAG
 
Protein sequence
MTPERLGLLW GITVFAGACA RLFSSFTGFP SVVILLLSGL FIGRSGLGLV EPLDLGQGLE 
TIVGLLVCLV LFEGGLNLKL PEGNIRNTVL KISLVRLFIS LSAGIFIAHW LAGLSWQVAG
IYSAIVLATG PTVVSPLVEQ IKLASPLSEV LKAEGLLLEP IGAVLALLLL ELTLGDLRGI
NDVFIALMQR LGGGVLIGLT AGWLLSEILK KIKNEASFGI ELQVTLGFIF LVYGICEYFL
PESGLPASVA AGFIVGKREV IDKDRLDNLI GELAQLAITV LFPLLAADVS WSELSPLGWG
GVICVFMLMV IVRPISIWIA TMGRELDLKE KVFLAWLAPR GIVTAAVASL FSIRLEQAGI
LGAGRLQGLV FLTILMTVGI QGLTAKPLVN RLELGQKKN