| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91563 |
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| Symbol | POL5.3 |
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| ID | 4841102 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 287236 |
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| End bp | 290536 |
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| Gene Length | 3301 bp |
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| Protein Length | 1040 aa |
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| Translation table | 12 |
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| GC content | 51% |
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| IMG OID | 640392417 |
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| Product | RNA-directed DNA polymerase Tps5.3 polyprotein |
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| Protein accession | XP_001386649 |
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| Protein GI | 150866901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA ACTGCCCTGC TCCCTATCGT GAGGGTGAAG TTCCTCGTAT GGCTTCTCGT
TTCGGTCCTG GCGGTCCAGG AAAGCACCGC AGGAAGCACG GCTCTCGTCC AAAGCCTGCT
GCTCATTATG CTCTCGCTGA TGATGCTCTG ACCTTTGGTT TTGACCAGCC CGGTGCTTAC
TATGCCCATC TCGCCCACTA CACCCACTAT GCTCTCTTGG CTTCTTCTTC CTCTGCCAGC
TTTATTTTTG ATTCAGGTGC TTCTACCCAC ATTTGTAACG ACAGAAGTCT CTTCCATGAC
ATCGTTCCTC ACTCTGGTTC TGTCATGAAC GCCGGTCACG AGCCTCTCTC GATTGCCGGT
CGTGGTACTC TTGTGTTTGA TCTCCATGGT CAGAAGATTC GTGTCTTTAA CGTTCTTCAC
GTTCCTGACT GTACTCAGAA TCTTCTTTCC ATCCTGGCTG TTACTACTAC GGGCGACAAG
CTTGTTATCT CTCATGATGA CATTGTTCAC CCTAAGTATG GCCAACTTGC TACCAGAGAC
CTGAGAAATC TTTACTTGCT GTGTCTCGAA ATTGTCCGCC CCTCGACTGT CTCGCGGGCT
AACCACTCTG CCTACTCGGC CCCCGCTCCT GTTACGGTCG CTACTCCTGC TGCGGACCCT
GGTGTGGCAC CTATTTCTGC CTCTGCTCTT GTCCATGCTC GCCTTGGCCA CCCTTCTCCG
ACTGTCGTTC GTCTGGCCTT GAAATATCCG AACATGCCTC GAACGGCTGT TCACGACTCG
ATTTCATGTG AAGCATGTCT TCGCTCCAAG AGCACTCGGG TTATTCCCAA AACGACCACC
GGTCCAGTCA CATCTGCTCC CTTGCAACTT CTTCACTGTG ATTTGTCCGG TCCTCATGCC
GGTGGTCCCT CCTCGTTGTT TTATTTTTGT ATTCTTCTTG ACGACTTTAC TCGCTTCAAG
GCTGTTGGCC CTATCCTCAA GAAATCGGAT GCTGCGGACT TCATTATCAA AGTTATTAAG
GCATGGACAA ACCACTTCTC CAGTCGTGGT GGCTACCGTG TCTGTAACTT TCGTTCTGAC
AATGGAGGTG AGTTTGTCAA TCTGACGCTT ACTTCATTCT TTGCGGCAGA AGGTATCCAG
ACCCAGCTCA CTGTGCCTGG TAACTCACAT CAAAATGGAC GTGCTGAAAG AGCGATTCGC
TCCGTTCTTG ACAAAACGCG TACCATGATT ACTGCGAGCT CTCTTCCTTC GCCCCTCTAC
CCGCATGCAC TCCAACATGC TGCATTTCTC CTAAACCGGC TACCAACACC TGTTCTCCAA
AATCGCTCGC CATTTGAACT CTGGCATGGC GCGAGGCCTA TCTTATCTCA ACTTAAAGTG
TTTGGGTGTG CTGCCTTTGT GAATGTTCCA CCCAATCACC GTCAACTGAA GTTGGTCGCT
CGTGCAATCA AGGGTGTTTA TCTTGGATCT GATCCGTTTC GGAAAGCTCA TCTTGTTTAT
GATCTCGCTA CCAGACAAGT GATTACCTCT TCTCATGTTC GGTTCCAGGA AAATGTCTTT
CCTTTTGCAA GACCTCTGAC GTCAACTGTC GTGTCGGCTA CCTCCATTGG TGGTGGTGGT
AGTGGTGGTG GAAGTTTTCC TTCTATTCTG GCACCCGCTC CAGGCCTCAC TCAGGGTCCT
CATGTATCTC TGGCCCCATC TCCCTCACCT CCATCCACGC CATCTGGCAG TACTGTTGCT
CAATCGCCAG GTTCATCTGC AGCTCTGTCG TCTGCTTCGG CACCGGTCTC TCCTGCTGCA
TCTACTACTC ATCTGTCGCA GCCTCCGTCG ACTCCTACAC CGGTGCCTTC TCCTATTCTG
GTGCCTTCTC CTATTCTGGT ACCTTCTCCT ACTCCGGCGC CTGCTTCTGC TCCGGTATCT
TCTTCTGCTC CGGTACCCTC TACTTCGGCG GTCCAAACTG CTCCTTCCCG TGCAGTTGTT
CCGGTTCAGA GGTCCGATCT GCCTCCCTAT GATCCCTACG AGCTGTCTGA CGACTCCTAC
ACAGCTCCTG CTTCTCGTGA GGTACCATCC ATTCCTGCTC CTCGTAAGGT ACCATCCCTT
CCTGCTCCTC GTCAGGTACC ATCCCTTCCT TCAACTCGTA AGGTGCCATC TCTTCCTTCT
ACTCGTACGG TACCTTCACT TCCAGCACCT CGTACAGTAC CCTTACTTAC TACTGCTCCT
CTCGGTCTTC CTCATCCTGC GGTTGAGGCT CCACCCACTA TCCCTGGATC TTCATCAGCC
ATACCCATGG AAATAGTTTC TACGGATACT GAGCCTGAGC CTATGTCTGA AGATGGCAAT
GACATGGAAG TAGTCTTTGA TCAGGAATTC TTCGATGCTC CTGAGTAATA CGGTACTCAT
CCACGTTCGT CACCTCTGAT CTCCACACGC TCCTCTATGG ATGTTCTGCT GGATCAGGAA
GAATATCCAG ATCCGTCCAC CTATATGGAC ATCGTGGTGA TGGATTCGGA TGATCTTTCT
TCTTATCACG ACTCGGAAAT GGAGGATGCC TCCGACATGG ATCCCCTTCC GCTTATTCGT
CCTACTTCTA ATATGGAAAT GGAGGACACC TCCACCACTT ATTCTCTGCC GCTTACTCGT
CATACTCCTA CTACGCAGAC TGTGGTGTCC TCTACACCTC CACCTCCTCC TCAACCACTG
CCTCGGGTGG TTCAATCCGA CTCTCCTCAA TCGTCTCCTA TTATTGAGGT TCCTGATTCT
CCCCCACTTC AATCTCGTCC TCCGCAATTC CTCCTCCCTC CGGGTCTTTC TCCTACTCGT
CTCATTGAGT TGCCTGCTTC AGGGGGGATG GAACTCATCC TATCGCTGAC TGACCGTGCC
TTGGTCCCTC TGAATTCTGA GGCCAACAAC GAACTAACTC ATCTTGTTGT ATCGCGTCCT
CCTCCGGTGA ATGGGGTTAA GCATAAACTC ACCCCGGTTC CGTCGCGTGA TGGAACACAT
CCACAAACAC TCAAGAGGGC GCACAGACCA ATACTTGCTC CAACACGGTC ACAGAGACAA
CAGGACAATC AAAATTTGAT CAGCTATCCG CAGAGACAAC AAATTGAGTA TATTACCACC
GATAGTGAAT CATTTTCAGA AGCAGACAAT CCCAACGATC CCGACTACAC AGAAACACAC
GGCCAACCTC TTATTATGGG TAGCAGTGCA TATATGGTCA CCATAATGAC TCCCCAAGTG
CCACGCACCT ATGAGGAAGC CACTAACAGT CCTCAACGAG AACGATGGAT TGAAGCTATG
A
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| Protein sequence | MAKNCPAPYR EGEVPRMASR FGPGGPGKHR RKHGSRPKPA AHYALADDAS TFGFDQPGAY
YAHLAHYTHY ALLASSSSAS FIFDSGASTH ICNDRSLFHD IVPHSGSVMN AGHEPLSIAG
RGTLVFDLHG QKIRVFNVLH VPDCTQNLLS ISAVTTTGDK LVISHDDIVH PKYGQLATRD
SRNLYLSCLE IVRPSTVSRA NHSAYSAPAP VTVATPAADP GVAPISASAL VHARLGHPSP
TVVRSALKYP NMPRTAVHDS ISCEACLRSK STRVIPKTTT GPVTSAPLQL LHCDLSGPHA
GGPSSLFYFC ILLDDFTRFK AVGPILKKSD AADFIIKVIK AWTNHFSSRG GYRVCNFRSD
NGGEFVNSTL TSFFAAEGIQ TQLTVPGNSH QNGRAERAIR SVLDKTRTMI TASSLPSPLY
PHALQHAAFL LNRLPTPVLQ NRSPFELWHG ARPILSQLKV FGCAAFVNVP PNHRQSKLVA
RAIKGVYLGS DPFRKAHLVY DLATRQVITS SHVRFQENVF PFARPSTSTV VSATSIGGGG
SGGGSFPSIS APAPGLTQGP HVSSAPSPSP PSTPSGSTVA QSPGSSAASS SASAPVSPAA
STTHSSQPPS TPTPVPSPIS VPSPISVPSP TPAPASAPVS SSAPVPSTSA VQTAPSRAVV
PVQRSDSPPY DPYESSDDSY TAPASREVPS IPAPRKVPSL PAPRQVPSLP STRKVPSLPS
TRTVPSLPAP RTVPLLTTAP LGLPHPAVEA PPTIPGSSSA IPMEIVSTDT EPEPMSEDGN
DMEEEYPDPS TYMDIVVMDS DDLSSYHDSE MEDASDMDPL PLIRPTSNME MEDTSTTYSS
PLTRHTPTTQ TVVSSTPPPP PQPSPRVVQS DSPQSSPIIE VPDSPPLQSR PPQFLLPPGL
SPTRLIELPA SGGMELILSS TDRALVPSNS EANNELTHLV VSRPPPVNGV KHKLTPVPSR
DGTHPQTLKR AHRPILAPTR SQRQQDNQNL ISYPQRQQIE YITTDSESFS EADNPNDPDY
TETHGQPLIM VLNENDGLKL
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