| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88926 |
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| Symbol | RBP2 |
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| ID | 4838994 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 106720 |
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| End bp | 109962 |
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| Gene Length | 3243 bp |
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| Protein Length | 844 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390309 |
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| Product | conserved hypothetical protein DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain |
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| Protein accession | XP_001383979 |
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| Protein GI | 150864953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5141] PHD zinc finger-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.492923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAATTACTG CTGTCAAGTT GTGTCTGTCT TGAATTTTCT GTCTGAAGCA ATTATCTTTC
TGTCAGACAA ACGTTCTTAT ACTGGGGAGT TTTGACTTTT TGTCGGAGTT GCGTAGTGTC
TGTGTAACGC AATTGTGCAT TCTCCGCTAA TATCAGAATC CATATTTTTG CTAAAGAGAG
CTGAAATTGA AATTCTGCAA TTTTGTAATT ACACCATTAT CTCCTGCTAT TTGAAGCCGG
TTCTGACGCT GCTGTTAGGT AATATTGACT CGGCTGACAT TGATATTGGT TTCTAGTTGT
TTTATCGCTT CTGCCGTTGG CTCTGTGCGA TTTTCTATCA TTGGCTGGAT TGGCTAGATT
AGCCCTAACT AAGTTCAGAA GTTCCAGAGT TTTTTGGCTG GTATTTCGTT TCCATTTCGT
GTCTATTGTA ATTCGTAGTA GCTCAAATGT TTGACAAGCT GTTACTAACT CCGTGTCCAG
TTCTCCGTCC CTCGGAAGAA GAATTTGGTG ATCCCATCGG ATACCTCTCT CGGAAGGACA
TAAGTGCACT TGGTGCTGAG TATGGTATTG TCAAAATTGT GCCTCCAGAC TCGTGGAAGC
CCCCATTTAT GATTTCTGAT GACTTTCGTT TCCACACAAG ACTCCAGAAG CTCAGCGACT
TGGGTTTGTC GACTCGGTGC CGCAAGTTCT TTCGAGACAA TATCAATCGG TTTATGAAAA
TGCGTAGAAA GCGACCCTTG CGATTGTACT TCCGGGCCAT CGATCCTTTG GTTCCGACTA
GATTTATCAA GGTCTACTAC TACGATCTTT ATGTAGCAGT AGACAACCAT GGGGGCTACG
ACAAGATGAC GTCCGAGTCG TGGAGTAAAG TGAATAGCCA GTTTGGAGTC GCTGCTGACT
CAAATCGCAT ACGAGACGTA TACGAAGCCA ACTTGCTTCC CTATGCGAGC TATATAGATC
ATAACAACTT CAACTACCAT TTCCCTCAGA GCGATCTGGA AGACGAGTTT GACAATTGCT
TAATCTGTGG GAAACACGAC AGACCCTCTA GAACTTTGCT CTGCGACAAT TGCGACAACC
CTTATCATAT GGACTGTCTA CCTACTCCGC TAGATGACAT CCCAAATGGC AATTGGTACT
GCGACAAGTG TGTCATCGGA ACTGGTGAGT ATGGCTTTGA AGAAGAGGTC GATGTTAAAT
ACACCATCGA TGAGTTCGAG AACGAGTGCG AGCAGTTCAA GCAGGAGTTT GAGGAAAAGT
ATAACCGTGG AGAGCCTCTA ACTGTGGATA CCATCGAAAA GCGGTTCTGG GACTTTGTAG
AAGCGCAGAA CTCAGAAATA CAAGTCAAGT ACGGAGCGGA CATTCACAAC TTGGTGCCTG
GTCAGATCAG TGGATTCCCT ATGGAAAATA CTCCGGGTAT TAATGCTAAG GACCTGGAGT
CCCAGAATTA TATCAACCAT CCTTTCAATC TTACAAGACT TCCATTTGCA AAAGGGTCGT
TGCTTAACTA CATTAACACG AGCATTTCTG GAATGACGGT ACCCTGGATC TACGTTGGCT
CTTTACTCTC GACTTTCTGC TGGCATGTAG AAGACCATTA CACTCTTTCT GCTAACTACT
GTCATATGGG AGCCACTAAG AAATGGTACG GTATCCCATC GTCACAAGCG AATCAGTTCG
AGAAATTGAT GAGAGAGTCA GCTCCAGATT TGTTCAAGCG TCAGCCGGAC TTGTTGCACC
AACTTGTGAC TTTGATGTCG CCCATGAAGC TAGTGGAAAA TGGGATCCGT TGTGTTTACG
CTGATCAGAA TCCGCGAGAA ATGGTGATAA CTTATCCTAG AGTGTATCAT GCTGGTTTCA
ACTGTGGATT CAACTTCAAC GAAGCTGTCA ACTTCACCAT GAACTGCTGG CTTGAATTCG
GTGAAAGATC TATCAACGAT TACCTGTTGA TCGGCAAAGA AAATGTGTTT AATCACTACA
AGTTGATTGA AAACATCCTC AAGGCTTTCA ACAAACAAAG AGGAAGCATC AGTCGAGAAG
AAATTGACGT AGTCAAACGA AGCTTGCTAA GTTTCGAGTC CTATATACTC AAGCAGAATG
ACCTTCTTTC ACAAATCGAC AAAACAAAGC TTGTCCAGGA GTACATCCCC AAGAAGTTTT
CACCAAGAAA GTTTGAAGAA GAACAGGCTG GTATTTATTC CACTGATGGT GATGATGAAG
AGGACTTGTG TGATTTGTGT AAAACCCATC TTTCGTATCA GTATTGCATC GTCAACAATA
GGAACCATAA GTTTCGGCAA CATCTCGCTT CTACAGCTCC TGCGTTTGCT ATTAATTCTG
CTACTGATAC TGCTGCTGCT GTTGCTAATA CTAATGCTGC TAATACTACT GCTACTAATT
CTGCTACTAA TAGTGTAGTC ACTAATTTTG CTGATAATAC TGCTATTAAT GCTTGTTCTA
GTAGTAGTGT TCCTACTGTT GCTGCTACTA GTTCTCCTTC CATTGCGCCA GCATCCACTA
CTGTTATAAA GCAAGAGCCT ACAGAGATCA GAAGAATTAC AATTCAACAG CTTCTCACAC
CAGATTCGTC GCCGTATGAA TCAAAGAAAA CGTTTGAAGA ACTGACTGTA GATGTCGGCA
AATTGGCTAC TTCAGAAGCT GCTCTCAGTA TGTCGAAGTT GAATGAAACA AAGACGGCAG
AGACAGGTAG TAAAGCCGAT GCAGGTAAAG GCGAAGATAA AGGCGAAGAT GAAGGTGATG
ATGAAGACGA CGAATCAAAG TTATGCATGA TGGAACAATT CGACGAATTG ATAAATAACG
CAAAGAGAGC AGCTTCGGAA GAATTACAAA ATACGGAGTC TGGTCAAAAG AGACGGCACT
CTCGTCGTTT ACAGGAACTA CCAAAGGTTC AAGAAATAAA GAAAGAGAAA GAAGGTGTCC
AGACAGTTGC TAAACGTCGT TCCTCTAGGC CAACTGGGAA AATGACTGGG AAAATGATGG
CTGTGCAACA ACGTTCAGAA ATCAAGCAGT TGAACGAAAA GGACACCATC AGGCTATGCT
TATCGTGCTT TATTAAGACA TACGAAAATA GCGATGGAAA GGTACCAGTT CCTGAGGAAT
CCATTCTTCA TTTTGAGAGT TATCCTTCGC AATTGAAAGA ATTGGTGAAG CTGACAAAGA
GAAATATCAA CGAATTGTTC TTGTGATTTA GTATTTAGTG AATAAAATAG AGTCCAATGA
GAA
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| Protein sequence | MFDKSLLTPC PVLRPSEEEF GDPIGYLSRK DISALGAEYG IVKIVPPDSW KPPFMISDDF
RFHTRLQKLS DLGLSTRCRK FFRDNINRFM KMRRKRPLRL YFRAIDPLVP TRFIKVYYYD
LYVAVDNHGG YDKMTSESWS KVNSQFGVAA DSNRIRDVYE ANLLPYASYI DHNNFNYHFP
QSDSEDEFDN CLICGKHDRP SRTLLCDNCD NPYHMDCLPT PLDDIPNGNW YCDKCVIGTG
EYGFEEEVDV KYTIDEFENE CEQFKQEFEE KYNRGEPLTV DTIEKRFWDF VEAQNSEIQV
KYGADIHNLV PGQISGFPME NTPGINAKDS ESQNYINHPF NLTRLPFAKG SLLNYINTSI
SGMTVPWIYV GSLLSTFCWH VEDHYTLSAN YCHMGATKKW YGIPSSQANQ FEKLMRESAP
DLFKRQPDLL HQLVTLMSPM KLVENGIRCV YADQNPREMV ITYPRVYHAG FNCGFNFNEA
VNFTMNCWLE FGERSINDYS LIGKENVFNH YKLIENILKA FNKQRGSISR EEIDVVKRSL
LSFESYILKQ NDLLSQIDKT KLVQEYIPKK FSPRKFEEEQ AGIYSTDGDD EEDLCDLCKT
HLSYQYCIVN NRNHNVPTVA ATSSPSIAPA STTVIKQEPT EIRRITIQQL LTPDSSPYES
KKTFEESTVD VGKLATSEAA LSMSKLNETK TAETGDDEDD ESKLCMMEQF DELINNAKRA
ASEELQNTES GQKRRHSRRL QELPKVQEIK KEKEGVQTVA KRRSSRPTGK MTGKMMAVQQ
RSEIKQLNEK DTIRLCLSCF IKTYENSDGK VPVPEESILH FESYPSQLKE LVKSTKRNIN
ELFL
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