Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_86106 |
Symbol | MRP12 |
ID | 4851113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 962133 |
End bp | 962853 |
Gene Length | 721 bp |
Protein Length | 177 aa |
Translation table | |
GC content | 40% |
IMG OID | 640392821 |
Product | conserved hypothetical protein |
Protein accession | XP_001387420 |
Protein GI | 126274099 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.377423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0811608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAAATTCGCT TTAGAATGCT TAGATCCTTG TTCAGCCCCA TGAGGTTGTC TTCCATGTTG AAGCCAGTGA CCAAAAATGT GCTGCCTGTG ACAAACTATA TGACTTCCAT TCGTTCCAAT ATTCCTATAG CTTCTCAGCT TGGCAATGTA TTCAGTCATC AGAAAAGGTA CGCTACACTC AACCAAGTTA AGTATGGAAA ACAGGGCTTT CCAAACAAGC CTTATGTGAG TAAGGCTCCA GATTTGGAGA CTGCTCCATT TAGAAAAGGT GTCGTTTTGC GTGTGATGAT TCTCAAGCCT AAGAAGCCTA ACTCGGCATT GAGAAAGTGT TGTAGAGTAA GATTGACTAA TGGGAATGTA ATTTCAGCTT TGATTCCAGG AGAGGGCCAC AACTTGCAAG AGCATCACAT TGTTTTGGTT CGTGGTGGAA GAGTACAAGA TATTCCTGGT GTCAAGTACC ATTTGGTGAG AGGTGCCTAT GATTTGGCAG GCGTAGCCAA TAGGGCCACT TCTAGATCAA AGTACGGTGT CAAGAAGCCA AAGCAGTAAA AGTAATGTAA ATTATTTTAA AGACAGCATC AAGCTATATG AGGCTACTAA TGCTTGAGGG TCAATACCTA TAAGCAATAC TATATAATCA TTGACACCTT CTAAACTTCA TAGAATCAAG ATTCATACTC CTTTGTACAT AGACGAACTC ATGAATATAC TATCTAATGT T
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Protein sequence | MLRSLFSPMR LSSMLKPVTK NVLPVTNYMT SIRSNIPIAS QLGNVFSHQK RYATLNQVKY GKQGFPNKPY VSKAPDLETA PFRKGVVLRV MILKPKKPNS ALRKCCRVRL TNGNVISALI PGEGHNLQEH HIVLVRGGRV QDIPGVKYHL VRGAYDLAGV ANRATSRSKY GVKKPKQ
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