| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85334 |
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| Symbol | JEN12 |
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| ID | 4840455 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 91398 |
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| End bp | 92903 |
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| Gene Length | 1506 bp |
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| Protein Length | 493 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391770 |
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| Product | Carboxylic acid transporter protein homolog |
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| Protein accession | XP_001386032 |
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| Protein GI | 150866432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCA AGTCAGTTCA TACTATTCAA TCGATCCAAC TTCAAGAGAT CCGTGATCAC
AACAAGCACA TTGTGCAACC GCCAAAATTC ACTGCTCAGG CTATCAAGAA TTACTTTGGA
TCGAGATTTA GATCTTTGTT TGTCCCAAAG GAAGAACTTG AGCAGTACAC TTGGGCCGAT
ATCTACAACC CTTTCTCTGC CTTGCGAGAA GTCAGCTTAA GGGAATGGAA CTTCTTCTTC
CTTGGTTTCT GGGCTTGGAC CTGGGATGCT TTTGATTTTT TCACCGTTTC TTTGAACATT
ACTAACATTG CGGAAGCTTT GGATCTGTCA GTCAAAGATA TCTCCTGGGG TATTACATTG
GTGTTGATGT TGAGAACTGT CGGTGCTATT ATATTTGGTT TGATTGGTGA TACTCGTGGT
AGAAAATGGC CCTACATTAT CAACTTGGCT CTTTTGAGTG TCATTCAAAT CGGAACTGGT
TTTGTACAAA CTTATAAGCA ATTCTTGGCT GTTAGAGCTC TTTTCGGTAT TGCCATGGGT
GGTTTGTTCG GTATTTGTGC TGCTGAAGCA TTGTCGGACG CCCCAAGAAA GGCCAGAGGT
ATAATGTCTG GTATCTTCCA AGAAGGTTAC GCTTTCGGTT ACTTGTTGGC CGTTGTTTTT
CAAAGAGCTA TTGCAGACAC CAGCAGCTGG AGAAATGTCT TCTACTTTTC TGCTGGTGTC
GGTGTCATTT TCATGGTATG GAGATTTTTC TCTCCTGAAA CCGATTCTTT CTTGAGGCAA
AAGGCTAGAA TGGAAGAAAC TGCTGCTGCT GGCGGCCAAG GTGGTTCCAA GGTTGCAGCT
TTCAAATCCC AAGCTCGTAA GGCCATGAAG CAATATTGGT TAATTGTCAT CTACTGTGTC
TTGATGATGT CTGGTTTCAA CTTTTCTTCT CATGGTTCTC AAGATTTGTA CCCTACCATG
CTCAAAAACC AATACCAATT CAGTGCCGAT AAGAGTACTG TTGCTAATGT TGCTGCCAAC
TTGGGTGCTT GCGCTGGTGG TATTTTTGTC GCTCACATGT CTACTTTTAT TGGTCGTAGA
TTAGCCATCA TTTTGGCAAC GATTCTTTGT GCTGCTGTTA TTTATCCATG GGCCTTCATT
CCTAACGCAG GATCTGCATT CGCATTCCAA TTCGGTATCC AAGGTGCCTG GGGTGTCGTT
CCAATCCACT TGTCAGAATT GTCTCCACCA CAGTTCAGAT CTTTCGTCAC CGGTGTTGCC
TACCAGTTAG GTAACTTGTG TTCTTCTGCA TCCTCCACCA TCGAAGCCAC CATCGGTGAA
CGTTTCCCAA TTTCTGGCAA GGGTCCAGAT GTCTACGATT ACGGAAAGAC CATGGCCATA
TTCATGGCAT GTGTCTTGGT TTACCAACTT ATTATTATCT TTATCGGACC AGAAAACAGA
GGTGCCGACT TGGGTATCGA AAGAGACGAT ATTCTCGATG AAGATGCTTA CGAAGACGAC
GACGAA
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| Protein sequence | MDTKSVHTIQ SIQLQEIRDH NKHIVQPPKF TAQAIKNYFG SRFRSLFVPK EELEQYTWAD
IYNPFSALRE VSLREWNFFF LGFWAWTWDA FDFFTVSLNI TNIAEALDSS VKDISWGITL
VLMLRTVGAI IFGLIGDTRG RKWPYIINLA LLSVIQIGTG FVQTYKQFLA VRALFGIAMG
GLFGICAAEA LSDAPRKARG IMSGIFQEGY AFGYLLAVVF QRAIADTSSW RNVFYFSAGV
GVIFMVWRFF SPETDSFLRQ KARMEETAAA GGQGGSKVAA FKSQARKAMK QYWLIVIYCV
LMMSGFNFSS HGSQDLYPTM LKNQYQFSAD KSTVANVAAN LGACAGGIFV AHMSTFIGRR
LAIILATILC AAVIYPWAFI PNAGSAFAFQ FGIQGAWGVV PIHLSELSPP QFRSFVTGVA
YQLGNLCSSA SSTIEATIGE HVYDYGKTMA IFMACVLVYQ LIIIFIGPEN RGADLGIERD
DILDEDAYED DDE
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