| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_75631 |
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| Symbol | GCV2 |
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| ID | 4836729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2411605 |
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| End bp | 2415026 |
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| Gene Length | 3422 bp |
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| Protein Length | 1033 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388044 |
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| Product | Glycine cleavage system protein |
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| Protein accession | XP_001383214 |
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| Protein GI | 126133378 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTCAGGTTC AGCTACTGCT TCTCTTACGG CAGTTCTTGT CTATCAGTGT CTACGTGCAC
GGCATACTCA CCTCTATCGT CTTATCACAG ACTCGAACTG GTTTCAGATT TCACCATAGA
TCGTTCTGTA AATCCAGTCA ATTTGTTTCA AAACACCCAA ATCATATTTG CCTATAGTTC
CATAGAGTCA CTCAACAGTG CTATTATCTA TTACCATTAC TTTTCATAAC TCCCATACAG
CATGTTCCAG GCTAGAGCCA TTCTTAGAGC TGCCCGTTCC TCTCGTCCTG CATTGAGAAC
CCCAGCCTCA TTTGCACCCA GAGCTATCTC ATTTGCACCC AAAACGGCTA GCTTGAGAGC
TTTTGCTACC AAAGCGGACA CTTCATCTGT CAATTATGCC AAGGTGTACA ACCCCAACTC
CGAAAAGGTG TCCATCGGCA ACTTGGACAC TTTTGCCAGA AGACACATAG GCCCCACTCC
AGACAACGTG ACCAAAATGT TGTCCTCCTT GGGCTACAGT GACTTGGACG AATTCTTAAG
CAAGGCCATT CCTGAACACA TTCTCTACAA GAGAAAGTTG AAGATCGAGC CTGCGCAAGG
TTTCACCGAA TCAGAAATGC TTGAGCACTT GCACGAAATT GCTGGCAAGA ACAAGATCGT
CAAGTCATTC ATTGGTAAAG GTTATGCTGG TACCAGATTG CCACCAGTGA TACAGAGAAA
TTTGTTGGAA AGCCCAGAAT GGTACACTTC GTACACACCT TATCAGCCAG AAATCTCTCA
GGGTAGATTG CAATCGTTGC TTAACTACCA AACCATGGTT ACCTCTTTGA CTGGCTTACC
CATGGCCAAC GCCTCGCTTT TAGATGAAGG TACTGCTGCT GGTGAAGCCA TGTCTTTGTC
TTTCCACAAC TCGAAAAACA AAAAGTCTAC TTACGTGGTT GACTCTAACA TCCATCCTCA
GACCTTGCAG GTGATCCAAT CTAGAGCTGA AAAGATTGGT GTTAAGATCG TAGAATTGCC
ATTGTCAACT GAAGAAGGTG TAGAACAATT GCAGAAGCTT TCTAGTGATG TTTGCGGTGC
CTTGGTTCAA TACCCAGGTA CTGATGGTTC TCTTTACAAC TACTCTAAGA TCGGTGAAAT
CGTCCATGCT GGTAAGGGAT TGCTTGCTAT GGCTACCGAC TTGTTGGCTC TCACTATGAT
CAAGCCACCA TCTGAGTATG GTGCCGACAT TGCCTTGGGT ACTTCGCAGA GATTTGGTGT
TCCATTCGGC TACGGTGGTC CACATGCCGC TTTCTTTTCT ACCAGCATGA AGTATTCCAG
AAAGATTCCC GGAAGAATCG TTGGTGTCTC TAAGGATAGA TTAGGCAAGC CAGCTCTCAG
ATTAGCCTTG CAAACCAGAG AGCAACATAT CAAGAGAGAA AAGGCCACCT CCAACATCTG
TACAGCTCAA GCTTTGTTGG CTAACATATC TGCCATGTAC GCTGTATACC ACGGCCCAGA
AGGATTGAAG AACATTGCTA AGAGAGTGTA TGGTTTCACA ACTTTGTTGG CTAACGAAAT
CGCCTCTTCT CACGAAATTA CCAACAAGAA CTGGTTCGAC ACTTTAACTG TTAGATTGAG
CGGCACTACT GCGGATGAAA TTTTGGCCAA GGCTTTGAAC GAACACAACA TCAACTTGTT
CAAGGTCAAT GATTCCACTG TCTCTGTCAC CTTGGATGAA ACAGTAGAAG CCCAAGATTT
GGCCAGTTTG GTCGAAGTTT TCACCGGTAA GGAGTACGAC GTCGCTTCCA TTGGTGAATT
GCCTCAATTC CCAGCAGAAA TCTTGAGAAC CGACGACATC TTGACCCATG AAGTATTTAA
CACCCACCAC TCAGAAACTG CTATGTTGCG TTACTTGCAT TTGTTACAGA GCAAGGACTT
GTCGCTTGCA AACTCCATGA TTCCTTTGGG TTCTTGTACC ATGAAGTTGA ATGCTACTGT
TGAAATGCAA ACGTTGTCGA TTCCTGGCTT CAACTCCATC CATCCATTTG CTCCTATTGA
CCAAGCCCAG GGCTACAAGG AGTTGGTGGA CGAGTTTGAA AAGGACTTGA ACGATATCAC
TGGATTTGAC GCCACTACTT CGATGCCTAA CTCCGGTGCT CAGGGTGAAT ACACTGGTTT
GTCTTTGATC AGACAATACC ACAAGTCCAG AGGTGACTAC GAGAAGAGAA ACATCTGTCT
TATTCCTGTC TCAGCCCACG GTACCAACCC AGCCTCTGCT GCCATGTGTG GCTTGAAGGT
GGTACCAATC AAGTGTTTGG ACAACGGTTC CATTGATTTG AAGGACTTAC AAGAAAAGGC
TGAAAAACAT GCTGAAAACC TTTGTTCCAT CATGATCACC TACCCTTCTA CCTACGGTTT
GTTTGAGCCA GGTGTCAAGA CAGCTATTGA CACTGTTCAC AAGTACGGTG GGTTGGTTTA
CTTGGATGGT GCCAACATGA ATGCTCAGGT TGGTTTGACA TCGCCAGGTG ACTTGGGTGC
TGATGTTTGT CACTTGAACA TCCACAAAAC CTTTGCATTG AGTCACGGTG GTGGTGGTCC
GGGCCAGGCT CCTGTCTGTG TTAAGGAACA CTTGAAGCCA TTCTTGCCTT CTCATCACTT
CCTCCAGACT CCTCACTCGA CTTCTGAGTC CATCAAGGCC GTCAACTCGG CTCCTTACGG
TTCAGCTTCT GTCATCCCAG TGTCTTACTC ATACATCAAG ATGTTGGGAG CCGAAGCCTT
GCCATATGTT TCTACAATTG CCATGTTGAA CGCCAACTAC ATCTTGAACA AGTTGAAGGA
CCACTACAAG ATCTTGTTCA TTGACCCCAA TGCCTCTGCC GACGAAGGCT TGAAGCACTG
TGCTCACGAA TTCATCTTGG ACTTGAGAGA ATTCAAGGCT GTCGGCATTG AGGCCATTGA
TGTCGCCAAG AGATTACAGG ATTACGGTTT CCATGCCCCA ACCATGTCTT TCCCTGTTGC
CGGCACCTTG ATGATCGAGC CTACTGAATC AGAAAACTTG GAAGAGTTGG ACAGATTCAT
CGACTCGTTG CTTGCTATCA GAAAGGAAAT CGAAGCCTAT GCCAACAAAG AGCCATTGGG
TTTGGTGTTG AAGAACGCTC CCCATTCATT GGAAGACGTT GTTTCTACTC CACAGGCAGA
CTGGGACGCC AGAGGCTACA CAAGAGAAGA GGCTGCCTAC CCATTGCCAT TCTTGAAGAC
GTCCAAGTGC TGGCCTACAG TCGCTAGATT GGACGACACC TACGGTGACA TGCATTTGAT
GTGTACTTGT CCATCAGTCG AGGAAGTGGC ATCTGAACAA TAGGTTCAGA TTCAGTTCGT
GTATGTATTT TAGTATTTAT AGATAGAAAA AAAAATCGAA TAAGAGATGT TTGACTTGGT
GT
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| Protein sequence | MFQARAILRA ARSSRPALRT PASFAPRAIS FAPKTASLRA FATKADTSSV NYAKVYNPNS
EKVSIGNLDT FARRHIGPTP DNVTKMLSSL GYSDLDEFLS KAIPEHILYK RKLKIEPAQG
FTESEMLEHL HEIAGKNKIV KSFIGKGYAG TRLPPVIQRN LLESPEWYTS YTPYQPEISQ
GRLQSLLNYQ TMVTSLTGLP MANASLLDEG TAAGEAMSLS FHNSKNKKST YVVDSNIHPQ
TLQVIQSRAE KIGVKIVELP LSTEEGVEQL QKLSSDVCGA LVQYPGTDGS LYNYSKIGEI
VHAGKGLLAM ATDLLALTMI KPPSEYGADI ALGTSQRFGV PFGYGGPHAA FFSTSMKYSR
KIPGRIVGVS KDRLGKPALR LALQTREQHI KREKATSNIC TAQALLANIS AMYAVYHGPE
GLKNIAKRVY GFTTLLANEI ASSHEITNKN WFDTLTVRLS GTTADEILAK ALNEHNINLF
KVNDSTVSVT LDETVEAQDL ASLVEVFTGK EYDVASIGEL PQFPAEILRT DDILTHEVFN
THHSETAMLR YLHLLQSKDL SLANSMIPLG SCTMKLNATV EMQTLSIPGF NSIHPFAPID
QAQGYKELVD EFEKDLNDIT GFDATTSMPN SGAQGEYTGL SLIRQYHKSR GDYEKRNICL
IPVSAHGTNP ASAAMCGLKV VPIKCLDNGS IDLKDLQEKA EKHAENLCSI MITYPSTYGL
FEPGVKTAID TVHKYGGLVY LDGANMNAQV GLTSPGDLGA DVCHLNIHKT FALSHGGGGP
GQAPVCVKEH LKPFLPSHHF LQTPHSTSES IKAVNSAPYG SASVIPVSYS YIKMLGAEAL
PYVSTIAMLN ANYILNKLKD HYKILFIDPN ASADEGLKHC AHEFILDLRE FKAVGIEAID
VAKRLQDYGF HAPTMSFPVA GTLMIEPTES ENLEELDRFI DSLLAIRKEI EAYANKEPLG
LVLKNAPHSL EDVVSTPQAD WDARGYTREE AAYPLPFLKT SKCWPTVARL DDTYGDMHLM
CTCPSVEEVA SEQ
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