| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_75489 |
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| Symbol | RBK1 |
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| ID | 4851909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3154822 |
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| End bp | 3155954 |
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| Gene Length | 1133 bp |
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| Protein Length | 333 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393617 |
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| Product | ribokinase |
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| Protein accession | XP_001387172 |
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| Protein GI | 126275991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.29059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TATGACTATC ATCACTGTCA TTGGATCCCT AAACTACGAC TTGGTTACTT TCACCAAAAA
AGTGCCAGAG GCTGGCGAAA CGTACCAGGC CGATGCCTTT GAAAACCATC TTGGTGGAAA
AGGTCTCAAC GAAGCTCTAG CCTCGTCCAG ATTAAGTGCA GACGACTCTA CGCAAGTCAG
AATGATTGGA AATGTTGGAT CTGACACTTT TGGAAAGGAA TTGGTCCATG AGCTCGAAGT
CACGGGTGTA AACACTACCT ATGTGAAGAC AATAGAAGGC AAGGCATCTG GAGTTGCAGT
GATTCTTGTG GAAGAGGACA GTGGAGAGAA CCGTATCTTG ATTACTGCCG GAGCCAATGG
CGAATTAAAG CCAACGGAAG ATGACTATTC TCTATACTTT CCTCGGGAAG AAGCTGATGC
TCATTACTTG ATCCTTCAGA ACGAATATCC AGACACCTTC AACACCATCA CTTGGATCAA
ACAGAATCGT CCTAACATCA ACATCGCATA CAACCCTTCG CCCTTCAAGC CGGAATTCAT
CACCTCGGAG GTTTTGTCGA GAATCGATTT ATTCATTGTG AATGAAGGTG AAGCCATGGA
TGTAGCCAAA CATCTCTTGC AAGATGAGGA ATATTCTAAG TTCGAAGCAA GTATCACCCA
AAACAGCATT GAAGGGTTCA AGCTGTTAGC TCTTAAGTTG CAAACCTTAG TCAATCAGAA
CAATATCAAA ACCATCATCA TAACTATGGG TAGTCGCGGA GCTACATATG TGTCCAAGGA
GACAGAGGTT CCACAATATG AGCCTTCAAG AAAGGTCCAG CACGTAGTGG ACACAACTGG
GGCTGGAGAC ACTTTCTTCG GCGGAGTGGT CCTGAGTCTT GCTGGAGGAA AGAAGATCGA
GGACGCAGTC AAGTTTGCTA CTACTGCTAG CAGTTTGGCT ATACAGAAGA AAGGAGCAGC
TGAGAGTATT CCTCACTACG ATGAAGTTTT GAAGAACCTT TAGAGAGTAT TCAAATAATT
CAAATAGAGT ACCGAGGTAA TAGTCTCACT ATTGAAAAGT TTTAAAGAAC CTTTAAATTA
ATATAAATAG AAGTCTAGAC ACAAAATAGT ATTAATAGTG CATTATGCTG AAG
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| Protein sequence | MTIITVIGSL NYDLVTFTKK VPEAGETYQA DAFENHLGGK GLNEALASSR LSADDSTQVR
MIGNVGSDTF GKELVHELEV TGVNTTYVKT IEGKASGVAV ILVEEDSGEN RILITAGANG
ELKPTEDDYS LYFPREEADA HYLILQNEYP DTFNTITWIK QNRPNINIAY NPSPFKPEFI
TSEVLSRIDL FIVNEGEAMD VAKHLLQDEE YSKFEASITQ NSIEGFKLLA LKLQTLVNQN
NIKTIIITMG SRGATYVSKE TEVPQYEPSR KVQHVVDTTG AGDTFFGGVV LSLAGGKKIE
DAVKFATTAS SLAIQKKGAA ESIPHYDEVL KNL
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