Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_62437 |
Symbol | |
ID | 4839854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1136774 |
End bp | 1137916 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391169 |
Product | predicted protein |
Protein accession | XP_001385912 |
Protein GI | 150866346 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.278061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0851814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTC CTATCCAATA CCAATTGGGC CATTTGCCAA TTAAGGACCA TGTCTTTTCG CCAGACCATT CCCTTTTGGC TGTGACCAAA GACACCAAGG TAGAAATTTA CCTGATCAAT ACTGCAAACT TGGCTGCGAA GCCAAAGCTC TTCACCGTTT TGGCTGGTCA TGACAAGACT GTCACATCGG TTGATATCTC CCCAGACGGT TCGAGAATCT TAACCTGTTC TCAAGACAGA AACGCCCTTG TCTGGGAATA CGACGGTGCC GCCAACGAGT ATAAACCAAC GTTGGTGTTG TTAAGAATCA ACCGTGCAGC CACCGTATGT AAGTGGTCTC CTGACGGACA GAAATTTGCT GTAGGATCTT CAGACAGAAT CATCGCTGTT TGCTACTACG AAGCGGAAAA CAATTGGTGG GTTTCCAAGC ACTTAAAGAA GCCTTTGAAG TCCACCATCA CATGCTTGTC GTGGCACCAA AACGGTGTCT TGTTGGCTTC CGGCTCGACC GATGGTCACG TAAGAGTCTT CAGTGCCTTC ATTAAGGGAT TGGACGAAAA GCCCGAACCT TCTCCTTGGG GAAGTAAATT GCCATTCCAA ACGCTTTGCG GTGACTTCAT CAACGATACG GGTGCCTGGA TCCACGGTGT AGCTTTCAGT CCTGATGGAA ACTCATTAGC GTTTGCCTCA CATGACTCGT CAATCGGAGT TATCTATCCT GAAGGAGAAG GTTTACCACC CAAGTCTATC ATCAACGTCA AGACCAACTA CCTTCCATTC AAGTCATTGG CTTACTTGAC CAACAACAAG ATAGTTGTTG GTGGCCACAA CTGTAACTTG ATTGTTTTTG AAGGAGACGA AACGGAATGG AGAGAATCTC GTGTCATTGA GTCTCAGAAA GATTTGACTA AAGAAGCTCC TTCTACTGGA GATGATGAAG ACGAAGAAAT CTCATCTCAC CAAGCGTTGA ACATGTTCAA GCAAATGGAC TTGAAAGGTA GAGTCAATAA GCCTTCTGCC AATAGCGGAG GCAACAGATT GAGCACTACT CATCAAAACA CCATCTCTAG TGTTAAAGTC TTTTCTGGTA ATCAAGTTTC CACTTCTGGT ATCGACGGCA AGATTGTCAT CTTCAATGTT TAG
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Protein sequence | MSAPIQYQLG HLPIKDHVFS PDHSLLAVTK DTKVEIYSIN TANLAAKPKL FTVLAGHDKT VTSVDISPDG SRILTCSQDR NALVWEYDGA ANEYKPTLVL LRINRAATVC KWSPDGQKFA VGSSDRIIAV CYYEAENNWW VSKHLKKPLK STITCLSWHQ NGVLLASGST DGHVRVFSAF IKGLDEKPEP SPWGSKLPFQ TLCGDFINDT GAWIHGVAFS PDGNSLAFAS HDSSIGVIYP EGEGLPPKSI INVKTNYLPF KSLAYLTNNK IVVGGHNCNL IVFEGDETEW RESRVIESQK DLTKEAPSTG DDEDEEISSH QALNMFKQMD LKGRVNKPSA NSGGNRLSTT HQNTISSVKV FSGNQVSTSG IDGKIVIFNV
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