Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59845 |
Symbol | |
ID | 4839542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1316196 |
End bp | 1317020 |
Gene Length | 825 bp |
Protein Length | 275 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390857 |
Product | predicted protein |
Protein accession | XP_001384944 |
Protein GI | 150865636 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.146296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.132245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTCAACGCCT ACTCAGCATT TGAAGCTTCC ACAGACGCCA CTTGGAATCT CTTTTGGAAC AGTGGCCAGC ACAGTTTGTC TTTGAACGAT GCCTCATGTC CAGGTTCAAC TTTTGCATAC CCACTGGTTT GGGATGTAGC TGTCGCTGGA ACCGCTTTCA CTAATAGTGG AAATACTGAA AGATTGAATG ATGTGGCTCA AAACCTCTTA CAATACAGAA GAGGCGACGG CTGGTTTTCC GCTTCAACTG CAAAGGATGA CGACATCTAT GTAGACGACA ATGCCCAGAT CTTGTGGGTC TTCGTCGATG CTTATAAAGC TACCAATAAC GGTGACTACT TAAGTATCGC GCAAAGAACG ATGGACTTAA TCAGATCGCA GTGGAATCTG AATATCGGTG GGATACAATG GAACAAAGAT GGTGATTATA TCGCTTCAAT TTCCACGTCA GAAGCTGCAT TGGCTGCTGT GAAATTGTAT GAGGTTGCCC CGGACTCCAA TTTGCTTGAC TTTGCTCAAC ATTGCTTAAA CTGGTTGTAC ACTAACTTGC AAGACCCCAA TGATCATTTG TTCTTTGATG GTATTTCCCT TCCTTCAGGT GACGTCAACC AAGGGAAATT GACTTATACA GTGGGATCAG TCTTATCTAC ACTTGCATAT TTGAACAAAT TTACTGGAGA GAGTAGCTTT TTGGATACTG CAGTTACATT AGGTAATGCA GCGGCCGGTG GGTCTGGTGC ATTCTACGGT AGCAACGGTT ACTGGAATAA CCAAATGAAG TACTCTCACC TATTGTTTGC TGGTATTGCA GATATTCTTA AATTA
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Protein sequence | FNAYSAFEAS TDATWNLFWN SGQHSLSLND ASCPGSTFAY PSVWDVAVAG TAFTNSGNTE RLNDVAQNLL QYRRGDGWFS ASTAKDDDIY VDDNAQILWV FVDAYKATNN GDYLSIAQRT MDLIRSQWNS NIGGIQWNKD GDYIASISTS EAALAAVKLY EVAPDSNLLD FAQHCLNWLY TNLQDPNDHL FFDGISLPSG DVNQGKLTYT VGSVLSTLAY LNKFTGESSF LDTAVTLGNA AAGGSGAFYG SNGYWNNQMK YSHLLFAGIA DILKL
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