Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59522 |
Symbol | |
ID | 4838383 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 431039 |
End bp | 432442 |
Gene Length | 1404 bp |
Protein Length | 447 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389698 |
Product | predicted protein |
Protein accession | XP_001384380 |
Protein GI | 150865243 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAT TCAGTGCTCT TTTCAGCATA AAGAAGTCTG ATGTAGATCA AGCTGTGGAC AATTTATTTG CCAGTTCCAG CGATGGGCCC GTCTCTAGGG AACAGTTGAA GAAGACCAGA ACTGTTGTGG AAGTTCCTGA ACCAGAAGAT AAAGAGTCTA TGGAAGTCGA CGAAGAAGAT GACAGTAATA GTGGTTCTAA TGATGACGAA GACGAAGAAG GTGATGAAGA TGAAGAAAGC GAAGATGATG AGGATATGGA AGAAGAAGAA GAAGAAGAAG AAGTGTCTAC CAAACAATTG AAGAAGAACA AGAAGAAGGC AGAACTCAAC GAGGACTTGG AATCCGAATA CTATTCCAAA CTTTTGAAGG AAGATAACGA AGAAAAAGGA GATATTGAAG AAGAAGGTGA AGGCAAGAAG AAGGAGTCTA GCGAAAAGAA GGCTACTGCT GCTACCAAGA TCGACTTGAA GGAATCCGAA CTTGAGAAGG CTGAAAGAAC CATTTTTGTA GGAAACGTCA CAGCTGAAGT CATAACATCC AAGATCAAGA CGAAAAACTT CAAGAAGTTT TTTTCTGACT TTGGAGCCAT TGATTCGGTC AGATTCAGAT CTATTTCCTT TGAAGGATTA CCCAGAAAAG TAGCCATTGC TACCAAGAAC TTGCATAAGT CCAGAGGTAC TTGTAACGCC TACGTGGTGT TCAAGGAAAA AGAAGCTTCG CTCAAAGCTG TTTCCGGAGC CAATGCCAAA GTGTTTGAGA ACTTCCACTT GAGAGTAGAC CATGTAGCTC ATCCAGCTCC TAAGGATAAT AGAAGAACCA TCTTTGTTGG GAACTTAGAC TTCGAAGAAG AGGAAGAGAA CTTATGGAGG TACTTCAACA CTAAGCTTGA CAACGATGTT GAGTCAGTGA GAGTAGTCCG TGATTCCAAG ACTAATGTTG GTAAGGGATT CGCTCTTGTC CAATTCAAGG ATACCTTGTC TGTAAACAAG GCTCTTTTGT TAAATGATAA ACCAATGACC GTAGACAAAG ATTCTAAAAA GAAAGGCAGA AAGTTGCGTA TCACTCGTGC CAAGTCCCAC ACCAAGCCAT CCATTTTGTC TCCAAACCAC GTTGACAACC TCAAGAAGAA GTTTGCTTCT AACAAGTCCA AGTCATTGGC CACTAAGTTG AGTGACCAAC AAAAGACTAA ACTCGGTAGA GCTCAGAGGG TTTTAGGGAA GGCTGACAAG GCTACAGTCG GTAAGAAAGT GATCATTGAA GGTCAAAGAG CCACCAAGGG CCAGCTGGTC AAGGGTATAA AGGGCTTGAA GGGTTCGGGA AAGATCAAAA AGCCTAGAAT AAGGGACAGA ACCACCAAGT TCAAGAATGA AAGAGAACTG ATGAAGAAAG AAATGGCCAA ATAG
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Protein sequence | MSSFSALFSI KKSDVDQAVD NLFASSSDGP VSREQLKKTR TVVEVPEPED KESMEVDEED DNDEDMEEEE EEEEVSTKQL KKNKKKAELN EDLESEYYSK LLKEDNEEKG DIEEEGEGKK KESSEKKATA ATKIDLKESE LEKAERTIFV GNVTAEVITS KIKTKNFKKF FSDFGAIDSV RFRSISFEGL PRKVAIATKN LHKSRGTCNA YVVFKEKEAS LKAVSGANAK VFENFHLRVD HVAHPAPKDN RRTIFVGNLD FEEEEENLWR YFNTKLDNDV ESVRVVRDSK TNVGKGFALV QFKDTLSVNK ALLLNDKPMT VDKDSKKKGR KLRITRAKSH TKPSILSPNH VDNLKKKFAS NKSKSLATKL SDQQKTKLGR AQRVLGKADK ATVGKKVIIE GQRATKGQSV KGIKGLKGSG KIKKPRIRDR TTKFKNERES MKKEMAK
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