| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56634 |
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| Symbol | ATM1 |
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| ID | 4837693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 788699 |
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| End bp | 790567 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389008 |
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| Product | mitochondrial ABC transporter |
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| Protein accession | XP_001383432 |
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| Protein GI | 126133815 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.718195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGT CACTTGTAGC TACCATCTGG CCCAAGAACA AACCCAGTTT CAAGATCAGG
GTGGTGATAG CATTGACGCT ATTGATTGGA TCGAAATTAT TGAATGTGCA AGTGCCTTTT
TTCTTCAAGA GCATCATTGA CGAAATGAAT GTGGAATGGT CAGAGCATTT AGGAACTGTA
GGAACAGTAA TTGGATCTTT GATTCTTGCT TATGGTGGAG CCAGATTTGG CGCTGTACTC
TTTGGTGAGT TAAGAAATGC CGTTTTTGCT TCAGTAGCCC AAAGTGCCAT CAAGAGGGTA
GCTTACAATA CGTTTATTCA TCTCTTGAAT ATAGACCTAC AATTCCATTT GTCCAGACAG
ACAGGTGGCT TGACCAGAGC TATAGATCGA GGTACTAAAG GTATCAGTTA TGTATTGAGT
GCTTTAGTTT TCCACATCGT GCCAATAACT TTTGAGATTT CTGTTGTCTG TGGGATTTTG
ACTTATAATT ATGGATTATC ATTTGCTGCT GTGACTTTGG CTACGATGAT GGCTTACTCT
TTCTTCACTA TCAAGACCAC TTCGTGGAGA ACCGGATTTA GAAGACAAGC CAACAATGCC
GATAACCAAG CAGCTTCTGT AGCCTTAGAC TCGTTGATCA ACTATGAGTC TGTCAAATAC
TTTAACAACG AACTCTATCA GGCCAGCAAA TACGACTCAG CTTTAACAAA GTATCAGAAT
GCTTCCATCA AAGTAGCCAC ATCATTGGCG TTCTTAAACG CTGGCCAGAA CTTAATCTTT
ACGAGTGCCT TGACGGCCAT GATGTATATG GGATGCCAAG GTGTAGCCAC TGGAGCTCTT
AGTGTTGGAG ATTTAGTCTT GATCAATCAG TTAGTTTTCC AGTTGAGTGT ACCATTGAAC
TTTTTGGGTT CAGTGTATCG TGAATTGAAA CAGTCGTTGC TAGATATGGA AAACTTGTTC
CAATTACAGA ACTATGATAT CAAGATCAAA GATGCTCCTA ACGCCAAACC ATTGCTTTTA
AATGCTCAGG GAGTTCCTGG TGAAATCAAG TTTGAAAATG TCTCATTTGG ATACCATCCA
GAGAGACCTA TCTTGAAGAA TGCAACGTTT ACTATCCCGG CCGGCCAGAA GGTTGCAATT
GTAGGACCCT CTGGTAGTGG TAAATCGACG ATTTTGCGTC TTGTATTCAG ATTCTATGAT
GTTGATGAAG GCAGAATCTT GATAGACGGT CAAGATATCA GCAAGATAAC TGTCGAGTCG
TTGAGAAAGT CCTTGGGTAT TGTACCCCAG GAGACTCCCT TGTTCAACGA TACAATCTTG
GAGAATATCC GGTACGGTAG ATTGGATGCT ACGGACGAGG AAATCGAAGA GATGATTGAA
AAGGTTCAAT TGACGAACTT GATCAAGGAT TTACCAGATG GTGTCAACAC TATTGTTGGT
GAAAGAGGGA TGATGATTTC CGGAGGTGAG AAGCAGCGTC TTGCCATTGC CAGATTGCTT
TTGAAGCGAG CTCCTATCAC TTTCTTTGAT GAAGCTACAT CTGCTTTGGA TACCCATACC
GAGCAGTCGT TGTTGAGGAC CATCCGTACA GTCTTCCGTA CAAAAAAGAA TACCAATGTG
TCAATTGCCC ATAGATTGAG AACCATTGCT GATGCTGACA AGATTATAGT GTTGAACAAG
GGTTCGGTGC AAGAAGAGGG CACACACTAC GGTTTATTGG CCGACCAGCA TTCGCTTTAC
GGTCAATTGT GGAACATCCA AGAGAACCTC GACCTTGAGA AGCACTTGAA AGATGATCCA
GAAGAGGTCC AGAAGTTGGA CAAGTTGGAG AAAGAGTTGG AGAAGGAGGA GCTCACTAAG
CAGACATAG
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| Protein sequence | MLKSLVATIW PKNKPSFKIR VVIALTLLIG SKLLNVQVPF FFKSIIDEMN VEWSEHLGTV
GTVIGSLILA YGGARFGAVL FGELRNAVFA SVAQSAIKRV AYNTFIHLLN IDLQFHLSRQ
TGGLTRAIDR GTKGISYVLS ALVFHIVPIT FEISVVCGIL TYNYGLSFAA VTLATMMAYS
FFTIKTTSWR TGFRRQANNA DNQAASVALD SLINYESVKY FNNELYQASK YDSALTKYQN
ASIKVATSLA FLNAGQNLIF TSALTAMMYM GCQGVATGAL SVGDLVLINQ LVFQLSVPLN
FLGSVYRELK QSLLDMENLF QLQNYDIKIK DAPNAKPLLL NAQGVPGEIK FENVSFGYHP
ERPILKNATF TIPAGQKVAI VGPSGSGKST ILRLVFRFYD VDEGRILIDG QDISKITVES
LRKSLGIVPQ ETPLFNDTIL ENIRYGRLDA TDEEIEEMIE KVQLTNLIKD LPDGVNTIVG
ERGMMISGGE KQRLAIARLL LKRAPITFFD EATSALDTHT EQSLLRTIRT VFRTKKNTNV
SIAHRLRTIA DADKIIVLNK GSVQEEGTHY GLLADQHSLY GQLWNIQENL DLEKHLKDDP
EEVQKLDKLE KELEKEELTK QT
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