| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52710 |
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| Symbol | |
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| ID | 4851549 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2106548 |
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| End bp | 2108695 |
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| Gene Length | 2148 bp |
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| Protein Length | 682 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393257 |
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| Product | predicted protein |
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| Protein accession | XP_001387645 |
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| Protein GI | 126274822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.120093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACTT TTTCCTACAA CGACAGCTCC ATCGAAGGAG ATGTGTACGT CCAGCGGTTG
TCCACTTACA TTCGTAGAAA CGAAGAGGCG CTTGCAAATG GTCTACTTTG TTTCTCGAGA
AACCACAACA CTCACATAAA GGTCAAGCCC TTGCGGCTTT CCTTCACCAT TCACCACTTG
TACTACATCA CAGAACGGAT CGAGTCGTCT CCATTGGGAG TAGATGTGGG TCCACTCAAT
ATCAAGCTTG ATAATCCCAA TCACGAGCCA ACTTTCATCT CGTTTATGGC GAATAATGCC
AGATCTCTGC GCCATTTTGA TAGTGATACC AGGTCGATCT CGTCTATCAA CTCGATGAAG
TCTATCGTAT CCAGTGCCTC TGTCTACTGG CGATCATTTG CTTTCAGTAA AGACCCCAAA
GTAATCAACA AGGACATCAA ATACCTATAC CTGTCTTTCA CAAAGATACC ATGTCTCATT
TTAACACCTA AAACCAAGAT TGCAAGCATC TCTTCATACG AAGAGTATCC CTGCGACACG
TCTGTGCCTG TCAAAATGTT CAAGAATTTG CAGGTCTTGG AGATCGTGGA CTATGATCCA
AACGAAATCT TTGGGTGGCA CATTCTCAGC GAACAACTAA GGATCTTGAT TATTAGAAAC
TCGAAAATTA GTAACATCTC TGAAGTCTTG CATAACCTAG TAATTGATGA CGAATCAGGA
AGATCTAGCT TCAACTCGCA CAAACAGCAG AAGAAGTATG GAGACGTATT TATATCCAGT
TCTGGTACAT CTCTCACTAC TACTGCCGAT GATAGTTTCA GCAATATCAG TGAGGTAAAT
GAGTTTCCCC AGTTCCAAAA CAATGCATTT AGATACAATC GTCGTGAAAG AGCGACCACC
GCATCGGGAG CAGGCTCCCT ACCCAAAGAT GTCTTTCTTC CGGACAATTT GGCGTCGTCT
TCTTTGGTTA ATAAGGACTA CCACAGATTA CCCGATAGCA AATGGTCGTT CTTGAAACAG
CTTACGGTTT CAGAAACGTC CATAACTTCT GTACCTTCTT TCATCTTCAA ATCTCTAACC
AGCTTGGTCA AACTTAACTT GTCCAACAAC TTGTTAGATG AAGTTCCTGA GGGCCTAGAC
ACGCTTGTAA ACCTCAAGTA TCTCAACTTT GCAGACAATT ATATTACAGA CTTGAAAAAG
TTGCCCAAGA ACCTTGTCCA TTTGTCAACG TTGAACTTCA ACAACAACAA ACTCACAGAT
TTGACGGGAT TGGAAAATTT GCATACTCTT GAGAAAATTG ACTTGAGAAG AAATAATCTT
GCTGATATAA AATCGCTCAA GCCTATTGTG TTACAGTTCA TAAAGAACCC TAATACTTTC
AACAATGTTT ACTTGTCAAG TAATAAGTTG CCCAAGAGCT TCAGAATAGA CCTTTTCAAC
TTATTCAATG GAGTCAAGTA CAAAAACGGT ATTAAAATCG ATGACTCCAG ACCGGGCTAT
TTTGAAAGCG CCTTATTGTT AGATGCCGAA AACGCGTTCA AGAACCTCGA GCGCTTCTTT
TCTGAGTCTC TCATGAAGCA GCCCAGTTTA CCGATGTCTC CCAAGACTGA AGCTGAGGCT
GATATCACTG TCAGTGAAGA ATCAGTCACA GCCAGTCCCA CCACGTCGAA GATTGACGAA
ATCACAGCCA CCGGCTCTTT GATCAAGAAT TCTGCTGCTA CGACCGACAG AATTCAATCC
ACCACTAATA CTATCGAGAC CTTAATGGAG CCGTTTTCGT CAATGAAGGT TTCTAATGAT
GAAGATACAC CAACAAAGAA GAAGTTTGAC CTTTCACATA CTGTATTATC TTCAGCACCT
ACAATTGTAC CTCCAGATGC TATCAGTGTC TCTTCCATCC AGAAAGCACC CAGCTCGCCC
TTGAGCGCCA ACACCAATTT AACCAACAAA CTCGAGGCTG CCACCGCATA CACATCCAAA
CCAAGTCTAA TGGGACTTCA TCTCAACAAC TCCAACGCTT CGATCCCCGG AAGTCCATCG
AACTTGAAGA AATCCACCAC CTTGGCCCAG CTCGATCTTG AGACGGTCCA GAACGCTGCA
CCCAACATAG TTACACAGGT TCAGGTGACA GCACGCATGA GCACCTAG
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| Protein sequence | MGTFSYNDSS IEGDVYVQRL STYIRRNEEA LANGLLCFSR NHNTHIKVKP LRLSFTIHHL
YYITERIESS PLGVDVGPLN IKLDNPNHEP TFISFMANNA RSLRHFDSDT RSISSINSMK
SIVSSASVYW RSFAFSKDPK VINKDIKYLY LSFTKIPCLI LTPKTKIASI SSYEEYPCDT
SVPVKMFKNL QVLEIVDYDP NEIFGWHILS EQLRILIIRN SKISNISEVL HNLVIDDESG
RSSFNSHKQQ KNSGTSLTTT ADDSFSNISE VNEFPQFQNN AFRYNRRERA TTASGAGSLP
KDVFLPDNLA SSSLVNKDYH RLPDSKWSFL KQLTVSETSI TSVPSFIFKS LTSLVKLNLS
NNLLDEVPEG LDTLVNLKYL NFADNYITDL KKLPKNLVHL STLNFNNNKL TDLTGLENLH
TLEKIDLRRN NLADIKSLKP IVLQFIKNPN TFNNVYLSSN KLPKSFRIDL FNLFNGVKYK
NGIKIDDSRP GYFESALLLD AENAFKNLER FFSELISLSV KNQSQPVPPP TGSLIKNSAA
TTDRIQSTTN TIETLMEPFS SMKVSNDEDT PTKKKFDLSH TVLSSAPTIV PPDAISVSSI
QKAPSSPLSA NTNLTNKLEA ATAYTSKPSL MGLHLNNSNA SIPGSPSNLK KSTTLAQLDL
ETVQNAAPNI VTQVQVTARM ST
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