Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33930 |
Symbol | DAL12 |
ID | 4841016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 801438 |
End bp | 803171 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640392331 |
Product | allantoate permease |
Protein accession | XP_001386566 |
Protein GI | 150866837 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.398969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.94031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACG AAAACTACAA CCTAGTGGAC TATTCCCATG GCTCTACTTA CAGTAGCACA AGCGACTCGG ATGACAATGA CCACGAGATC CACCAAGTGA ACAACCCTTT GATAAAGAAG AAAAGCCAAC TATTTTCTTC CGTGAGACTT GTAGGCAGTG ACTCTGATTC TCTTAATCAA GAGTATGATT CAGAAGAAGA TGAAATCGAC AACTCGCCTA ACCCTTTCTT GGATCCTAAA GTAGCTCACT ATTACCATAC GCTTTATGAA GGCTCCGAGT ACGAGTGTAG ACTGTTATAT GATCCAGACT TCTCGTGGAC AAAGCGGGAA GATGCTCTTG TTGTCAAAAA AGTAGATGGT GTCATAGCGT TGTTTGCATG TATCTTGTTC ACAGGTTTGC AAATAGACAG AGGAAATCTT CTGCAAGCAC TTTCCGATAA CTTTCTTGAA GACTTGAACC TCACCACAAA CGACTACAAT ATGGGGAACA CGCTATTTTT GGTGTGTTTT ATGATGGGAG AAATTCCATC CTCGATACTT TCCAAATGGA TAGGAGTAGA CAGATTTATC CCTTTCCAAA TGATCTCCTG GTCGATAGTA GCAGCCATGC AATGTTTTCT TACTGGTAAG TACACCTATT TTTTGGCAAG AGCTTTGACC GCTTTCTTAG AAAGTGGGTT GATTGCTGAA TTAGTTCTTT TCCTTTCAAC TTACTATAAG GCAAAGGAGT TGCCCATTAG ATTATCGTGG TTATGGGTGA CATTATCCTT TGTTCAAATT GGAGGGGCTA TTTTATCTCT CGGGATTCTC AGATTGAGAG GTTTCTTGGG ATGGGAAGGC TGGAGATGGC TCTTTTTGAT AGAAGGTCTG ATGACATTGG TTATTGGAAT TGGCGCTTAC CACATGTTGA TTCCTTCGCC CATGTCTCTA GTTGAAAGAG GATGGTTCTC GGAGAGACAA GTGAAGATTA TTGTCAATAG AACTTTGAGA GACGACCCTT CCAAAGGTGA CACCAATAAT AGAAGTGGGA TCACGATAAA GCAGGTGGTC AACGTTCTCC TAGACTACGA TTTGTGGCCC ATTTACCTTG TTGGGCTAAT TGCATTTATT CCATTGAGTA CTCTTTCCAG CTATATTCCC ATCATATACA GAGGGGTAGG GTTGACTACT TTCGAAACTA ATCTATTGCT TATTCCCCAT TACATTTTGC ATATTACTTT CTTGATATTC ATGACTAGGT TTTCAGAGAG AATCAACCAA CGGGCTTTGG TTGCTATCCT CACGCCCATT TATTTGGTTC CTATCATAGC TATCTTCAAG TATAAACAAG ATAGTTTGTC TACGGTAGGA ATATGGTTGC TTTCCACATT GATAGCTGGT GGTCCATATA TTCATGCTAT CTGTGTGAGC TGGGTTTCGC GGAATTCAGG AGGTATAAAG ACCAGAACTG TCAGTGCTGC AGTATACAAC TTAATTGTAC AAGCTGGTGG TATTATTGCT GCCAACATCT ACAGAAGTGA CGACGCTCCC CACTACCACC GTGGTAATAC CAACTTGCTC TGGATAGCTT TTGCTTTGTT CCCTTTACTT CTTGCTATAA AGGGCTATTA CTTGTTGAGA AACAAACGGA AGCAAGACAT CTGGGATGCA ATGACACTTG ATGAACAGAA CAGATACATA CATCACACCA CTGATTCTGG TAATAAGAGA TTAGATTTTA GATTTGATAG CTAG
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Protein sequence | MTNENYNLVD YSHGSTYSST SDSDDNDHEI HQVNNPLIKK KSQLFSSVRL VGSDSDSLNQ EYDSEEDEID NSPNPFLDPK VAHYYHTLYE GSEYECRSLY DPDFSWTKRE DALVVKKVDG VIALFACILF TGLQIDRGNL SQALSDNFLE DLNLTTNDYN MGNTLFLVCF MMGEIPSSIL SKWIGVDRFI PFQMISWSIV AAMQCFLTGK YTYFLARALT AFLESGLIAE LVLFLSTYYK AKELPIRLSW LWVTLSFVQI GGAILSLGIL RLRGFLGWEG WRWLFLIEGS MTLVIGIGAY HMLIPSPMSL VERGWFSERQ VKIIVNRTLR DDPSKGDTNN RSGITIKQVV NVLLDYDLWP IYLVGLIAFI PLSTLSSYIP IIYRGVGLTT FETNLLLIPH YILHITFLIF MTRFSERINQ RALVAILTPI YLVPIIAIFK YKQDSLSTVG IWLLSTLIAG GPYIHAICVS WVSRNSGGIK TRTVSAAVYN LIVQAGGIIA ANIYRSDDAP HYHRGNTNLL WIAFALFPLL LAIKGYYLLR NKRKQDIWDA MTLDEQNRYI HHTTDSGNKR LDFRFDS
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