Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33562 |
Symbol | |
ID | 4840605 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 962402 |
End bp | 963979 |
Gene Length | 1578 bp |
Protein Length | 505 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391920 |
Product | predicted protein |
Protein accession | XP_001386198 |
Protein GI | 150866556 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.884137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG AAAACAAAGC CAACATTAAG GCAGAAGGCA GTACTGCTAG TACAGGAGCC GGATCCGAAA CGGCAGCCAA TTCGGGCGAA AAAGTGCTTT CCAACAAGGA ATTGAAGGAG TTGAAGAAGA AAGAGAAAGC TGCGAAGAGA GCAGCGCAGA AGGAAGCAAT TGGGATCAGT CCAGAGCAGC AAAAACAGAA TGCTGAGCAG AAGATAGACA AAAGGAAAAA CCAAACCGCC ACCAATACGA ATTTGAAAAA GCAATTGGAC CAGACTGTGA TCAAAGATGG GGCCAAGAGG ATTCCTTCTT TGTTCAGTCA TTTGGAAACG CGAGAGCAGA GGAATGCTCT GTCACCTTCA ATATCTCACA TAGTTCATCC TGCCATACTT TCATTGACGT TGAAGTATTC GACGTATAAG GTCGTGGGAT CGACTTCCCG GTTGAGAAAC ATGTTGCAAG TGTTCAAGAT TGTTATTCAG GACTATCATA CACCAGAGAA TACGACTTTG ACCAGACACT TATCGGGCCA TTTATCACAT CAAATTGAAC ATTTGAAGAC AGCAAGACCA TTATCTGTAT CTATGGGAAA TGCTATCAGA TGGCTTAAGC AAGAGATCTC TCATATTTCC ATTGACACGA GCGAGAGTAA AGCTAAGGAG ACCTTGTGCT CCAAGATTGA CGACTTTATC CACGAGAAAA TAGATCTTTC CGACCGGGTC ATCATCGAAA ACGCGTCACA GCATATCACA AATGATTGTA CCATCATGAC TTATGGCCAT TCCGAAGTTT TGGAGAAGCT CTTCAAGTAC TGTGTCATAG AGCAGAACAA GAGGTTCAAC TTAATCATTG TAGATTCCCG ACCTTTGTTT GAGGGAAAAC GTCTCTTGTC CAACTTGGTC TCAACCAATT ACCATCCCGA AATAGAGGAG TCAGAGTCGG AGGTCGAGTC CATCTCCAGT AGAAGTACTA GACCTCATCC CATAACACGT GACAATCTCA AGGTCCACTA TGTGTTGATT AATGCCTTGT CGTCTACACT TTTGGAAGAT GTGGACTGTG TCTTTTTGGG AGCCCATGCC ATGTTGTCCA ATGGACGTTT GTATTCTCGT GTTGGAACTG GTTTGATAGC CATGATGTGT CATAGCAGAA ATATCCCTGT GTTGACCTGT TGTGAATCTG TGAAGTTCTC CGACAAAGTA CAATTGGATT CTGTCACTAC GAACGAGCTT GCCGATTGTG AGGACTTGGT TCATAGCATC AACTCGAAGA AACCTCCACA AAAGAAGTCA TTTGCCATGG AACAATTCAT CAAACAGTGT GATGAGGAAA AAGCTTCCAA TAACAAGAAC AACAAACAAC AGCAACAGCA GCATAAGAAG AAGGAAGGAT CGGCTGAGCC AGAACAAGAA TCAGATGAAG CACCTTTGAA AGACTGGAAG AGCTACCCCA ACTTGAACAT CTTGAACATC ATGTACGATT TGACTCCACC GGAGTATATC AAGAAGGTAG TGACTGAGTT GGGAGCGCTT CCTCCTTCTG CTGTTCCTGT AATCTTGAGA GAGTACAAAA ATACATAA
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Protein sequence | MTEENKANIK AEGSTASTGA GSETAANSGE KVLSNKELKE LKKKEKAAKR AAQKEAIGIS PEQQKQNAEQ KIDKRKNQTA TNTNLKKQLD QTVIKDGAKR IPSLFSHLET REQRNASSPS ISHIVHPAIL SLTLKYSTYK VVGSTSRLRN MLQVFKIVIQ DYHTPENTTL TRHLSGHLSH QIEHLKTARP LSVSMGNAIR WLKQEISHIS IDTSESKAKE TLCSKIDDFI HEKIDLSDRV IIENASQHIT NDCTIMTYGH SEVLEKLFKY CVIEQNKRFN LIIVDSRPLF EGKRLLSNLV STNYHPEIEE SESEVHYVLI NALSSTLLED VDCVFLGAHA MLSNGRLYSR VGTGLIAMMC HSRNIPVLTC CESVKFSDKV QLDSVTTNEL ADCEDLVHSI NSKKPPQKKS FAMEQFIKQC DEEKASNNKN NKQQQQQHKK KEGSAEPEQE SDEAPLKDWK SYPNLNILNI MYDLTPPEYI KKVVTELGAL PPSAVPVILR EYKNT
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