| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32169 |
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| Symbol | |
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| ID | 4839116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 850294 |
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| End bp | 853455 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390431 |
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| Product | predicted protein |
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| Protein accession | XP_001384830 |
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| Protein GI | 150865563 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.390072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCGT CAGGAGATTC CAATAGTAAT GGAGTTGTCT CTGGTGGTTT AGCTTTATCG
CTGGGTGGAC AGAATTCGCT ACAATTTCTG ATTTCGCACA TCCTCGGCAC ATCGGCTCGA
GCACCTCATC ATCTCTCAGT GCAAGACAAC TATGTAGCCT ATGCTGCCAG TGGAGGTGTT
GTCGTCCGTC AGTTGGACTT GGAAAATAAT AACGCCGTTA TCTCGGAGCG GTTCTTTTGC
GCCAACTCCA GTTCAGGCAA TGAAAACACT GCAAACAGCA TCCTGCCATC TGGTCCAGAT
GCATATCTCA ACATGGCACT TGAAATGGAA AGTAGTCACA ATTTGCATCA AAATCTCCAT
CAGAGTTCCA AGGATGTTCA GCCTGTAAGA GATAGATATG GCTATTCTAT CGCAACTGAA
CCTATCGTTG TTGGAGGTAG CAACAATATC GGAAATATTG CAGAATTAAC CCAAAGTGTT
CACGACATCG ACTTATCTTC GCCATCCAAG TTGAAAGACA GAGTCAGGTC CATAAACTGT
ATGTGCATAT CACCTAACAA ACGTTTGCTA GCCATCGGTG AAACGGGTTA TCAGCCACGG
ATACTTCTCT TCTCATTGGC ACCAGACCTG AGCTCAAATC CTGTTGCACT TATATATGAA
CACTCTTTTG GTATTAAATC GCTCTGTTTT CTGGCAGATC TGCGCTATCT TTGCTCTCTT
GGTCTTGTGA ATGATGGCTG TATAAATGTC TGGAGGATTT CTAACTCTGA TGTGCAGTTA
GCAGCTAACA ATAGGTGCTC TTCTGTGGTG AACAGATTGT TCTGGCATGA GGACTACATC
ATCACCTTGG GATTACGTTT CATAAAAGTT TGGAGGTTTT CGAGTAAAGA AGACAACGAC
AGAATCCTGG ACAAACCTCT AGCACTAAAA GGTAAAAGTG TCCTTTTGGG ATCGCTAATA
AGCTCGAATT TCACAGACAT ATCTGCCTTG AACAACGACG AATTGCTCAT AATAACAAAC
AACAACCAAT TGCTCTTGCT CAAGTTAAAT AGTGAACTCA AACTCATTTC ATTAGAAACG
CCCCCGTTTG ATTTCGATAC CTTATTGGTA GATTATGAGC TTGAAAAGAT ATGGTTTGGA
TCCAATTCCA AGCTAGAATC GTATTCTATA AACGATTTGA AACCTAGCTC TGTTTCAACT
CCTCTGACGC CTTCTTCCAG AGTAAATTCT GTATTTGGAG CACAAACTAA CGAAAACGTG
CGGACAGTTC CTATTCTTAG ACTCTTCAAT CTCAGTTCCA ACTACATCAT ATACCTTTCA
CATCGTGAAG AAATTGTATT GTACAATAAG TTCAAGTGTG ACATCGAAAG TAGAGTAGCC
AGCTCCTTGA TGAGCGAGCT AGCAGGTTTC AAGAACTGCC ATCTGGGAGA CCTATTGGTG
TATTCGCATT CTGGTATGAT TAAGAGGGTT ACAAAGGACT ATGAATTAGA GACCATTTTG
AAGTTTAACT TGCCGTCAAA CGAACTCATA TCAAATTCGC TTATGGCCGT AGACTCCAAC
AATGATTCAC TTTTGTTGGG AGACAAGTAT GGAACATTGT ATGTTGTCAA GATAACAGAA
GAAAAAGCAT CTGAAATTGT ATATCAAATC AAAGCACATT CATCTTCAAT TAACGACATA
GTATACTACG AATTTGGAGA CTTTCAGTTG ATAACAAGCA TAGCAAGAGA TCGTATGATA
CAATTCTTCT ACAAAAAACC AGGTACCAAC TGGGACATCT TGCAAACTAT ACCTATCCAC
AATGGCAATT TATTGAAAAT TCAGTATCAC AACAGCAGGA TATATGTCTG CTCATCTGAT
AGAACTATCT CTATTCACAA ACTTGAAGTT GTTGAGAGTG AATTGAGGGT TTTCCAAGAG
AAGATATTAT CTATGAAATG TAGTCCGATC ACTTTGAAAA TTGTAGACGA CGATTTGATC
GTGTCTACAA ACGACAAAAC TTTGTCAATA TATCTGGTAT CTCAGGGATT TGAGCTATCA
CGGACTTTAA AGCTTGTTAA CGGTAAAAAT AACGAGAGCT TACTTGTGGA GAACATCATT
GTATTTAAGA ATTTGCTCAT AACTTCCTCG ACAGACAAGT CTCTCAGAGT ATTCAATTAT
CATACTGGCA GACCAATGAG TGTAGCCTGG GGTCACCTGG ATGTGATATT AAGCTTGGAA
TTAAGTTCCA ATGAAGACTT GATTTCCATT GGGAAGGACG GTTGCTTGTT CACTTGGAAG
ATTAATGAAT CGACAGCAAC AAAGAATAAC ACATATAAGG AAGATACAAC ATATAAGGAG
GAAAGTAATG TGATTCCTAT GTATGCCAAT GTAACCAGAA AGATTCTTCC TATTTCTCCC
ATAAAGATCA ATGCACCCAA GATCGAAACA TGCACAAAAG AGGCGCCATC TCCACGTAAT
TCTATATCTC CCAGACTTAC AAACGCAACT TTGAAGAGAA TCGAAGCCCG TAGAGCTAGT
TCTCAGAGTC CCACTAGAGA TTCGGGTAGA TCAAAATCGG TTTCTACTGC GAAGCCATCC
TTGTCTATCA AACCTTTAGA AAAGGCACAC ACTATAAGCA CACTTTCCTC TACCGCGGGA
CCAGGACTTA CTTCTCCAAG AAGACCATTG TCTCCCATTA GACGCAGTCC ATCCAGAAAT
CTGTTAGATC ATTCACCAGT AAGGAGTCTG TTGGATCATT CACCCATGAA GCTTTCAAAG
CCACATATCT TATTTAGTCA TGATGAAAAA AGAACCGCAG ACCAACCTTT CGTGGATACA
GCTCTAGCCC AATTGCAGTT TATTGATTCT AAACTTCAAA GAGAAGTTAT AAGCAACAAC
GATAAGGCCA AATTGTTAAC CAAACTCGAC TCTATTTTTA GACAATTAGG TGGAGATAAG
GAGCTGACTA AAAGTAACGT TCGAGACAAA AGGACTGAAA TTAGCCAGAA TAGAGAAGCA
GATGAAAGAG AATTGTTGGA GTCATACAGC GATAAGCTTC TTCAACTTAT GGAATCTAAA
CTTGAGTCGA AGTATTCCAA GCAAGTTCCT CCACTTTTCA TTGGAGAAAA CCACTCTTCG
ATTTCAACAA CTTCCCAAGA CTCGCTGGAG GACATAGATT AA
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| Protein sequence | MPPSGDSNSN GVVSGGLALS SGGQNSLQFS ISHILGTSAR APHHLSVQDN YVAYAASGGV
VVRQLDLENN NAVISERFFC ANSSSGNENT ANSISPSGPD AYLNMALEME SSHNLHQNLH
QSSKDVQPVR DRYGYSIATE PIVVGGSNNI GNIAELTQSV HDIDLSSPSK LKDRVRSINC
MCISPNKRLL AIGETGYQPR ILLFSLAPDS SSNPVALIYE HSFGIKSLCF SADSRYLCSL
GLVNDGCINV WRISNSDVQL AANNRCSSVV NRLFWHEDYI ITLGLRFIKV WRFSSKEDND
RISDKPLALK GKSVLLGSLI SSNFTDISAL NNDELLIITN NNQLLLLKLN SELKLISLET
PPFDFDTLLV DYELEKIWFG SNSKLESYSI NDLKPSSVST PSTPSSRVNS VFGAQTNENV
RTVPILRLFN LSSNYIIYLS HREEIVLYNK FKCDIESRVA SSLMSELAGF KNCHSGDLLV
YSHSGMIKRV TKDYELETIL KFNLPSNELI SNSLMAVDSN NDSLLLGDKY GTLYVVKITE
EKASEIVYQI KAHSSSINDI VYYEFGDFQL ITSIARDRMI QFFYKKPGTN WDILQTIPIH
NGNLLKIQYH NSRIYVCSSD RTISIHKLEV VESELRVFQE KILSMKCSPI TLKIVDDDLI
VSTNDKTLSI YSVSQGFELS RTLKLVNGKN NESLLVENII VFKNLLITSS TDKSLRVFNY
HTGRPMSVAW GHSDVILSLE LSSNEDLISI GKDGCLFTWK INESTATKNN TYKEDTTYKE
ESNVIPMYAN VTRKILPISP IKINAPKIET CTKEAPSPRN SISPRLTNAT LKRIEARRAS
SQSPTRDSGR SKSVSTAKPS LSIKPLEKAH TISTLSSTAG PGLTSPRRPL SPIRRSPSRN
SLDHSPVRSS LDHSPMKLSK PHILFSHDEK RTADQPFVDT ALAQLQFIDS KLQREVISNN
DKAKLLTKLD SIFRQLGGDK ESTKSNVRDK RTEISQNREA DERELLESYS DKLLQLMESK
LESKYSKQVP PLFIGENHSS ISTTSQDSSE DID
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