| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31907 |
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| Symbol | DHR2 |
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| ID | 4839693 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 185143 |
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| End bp | 187767 |
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| Gene Length | 2625 bp |
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| Protein Length | 830 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391008 |
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| Product | ATP-dependent RNA helicase DHR2 (DEAH-box RNA helicase DHR2) (Helicase JA2) |
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| Protein accession | XP_001385054 |
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| Protein GI | 150865721 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.953528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCC CGTATTCTGG AGACGGTTCG GCTCCAGCTT CAAAAAAGAG AAAGAGAAAG
AGAAATAATA AAACCAAGAC AAAGTCTGAT GCCGATGCTC ATCTCAGTCA GGAACATGCA
GTTGCAAATG AAAACAATTT CCAGATCCAC AGTAGCAACA AGAAGTTCAA ATTTGATACC
GAAGAAAAGG AAGACGTGAT AAATCAGAAG AATAACGATT CCGTCGAAAA AGGAAATTTT
GAACATCACG AAGAGGAGGA CGAGGGTGAA GAAATTATTG AAGATGCTCC AGAAAAAGAA
GAACAAGTAG AAGAACGAAT AGAAGATGAA GAAGAGGATG AAGATGATGA GGAGGAGAAT
AAGATCAAAA CAAAAAATCC CAGGAAGAAC AAAGACAAGA AAAAGCACAA AAAAGACGTT
GAAGTTGGTT CTTCCAAAAG TTCTTCAACC AAGAATGTCA CTTTCTACAA TAGTGACGGG
GACGACGATG ACGAAGAAGA AGACTACTAT TCGAGCAACA GATTCTACGA AATTTCAGAA
TCTACTCGAG CTCAGTTGGC CAAAAAGGCT GAACAGTTGC TTGAGTTCAG AAAAGAACTT
CCAGTTTACC AACACAAGGA TGAGGTCATA GATTATGTCA CCAACAACCA AGTCACTGTA
GTAATTGGTG AAACTGGGTC AGGTAAATCT ACCCAAATCC CCCAGTTCTT GATGCCTCTA
AACAGTAAAC TGATAGCTGT AACACAGCCA CGTAGAGTTG CTGCTGCATC TTTGGCTGCG
AGAGTCAGTG AAGAGTATGG ATGTCAATTA GGACAAGAAG TTGGTTACCA GGTCAGATTC
TCTAATATCA CTCATCCACA AAAGACGAAG TTGAAGTATC TCACCGATGG TATGCTTTTG
CGAGAACTCA TGATAGACAG CAAGTTGTCG AAGTATTCCA CCATAATACT AGATGAAGCT
CACGAAAGAA CAGTATTGAC AGATCTTATC ATGGGATTCT TGAAACAACT TATTGTAACT
AAAACCAGAA GAGATTTGAA AATCATAGTC ATGTCGGCTA CGTTAAATGC CGAGCTCTTC
AGTAAGTTCT TCGGTAATGC CCCTATTCTC TTCATAGAAG GTAAAATGTT TCCTGTGTCT
CCCTTCTATT TGTCTGACTC TTCTGAGGAT ATTGTGGATA CCATGGTAAG GAGTGTTATT
CAAATCAACT TAGCAGAACA AGAGGGAGAT ATTCTCTGTT TCTTACCGGG CCAAGAAGAA
ATCGATAGCT GCGTCACCGT ATTGACTCAG GTGGCACCAT TGCTTCCAAA ACAGGCACCA
TTGCTAGTAC CAATGGCTCT CTACGCTGCT TTGTCTCCAG CCAAACAAGC TAAGATCTTC
GAAAAGCTTC CTGCAAGAAG GAGAAAAGTT ATTCTCGCTA CCAATATTGC CGAAACTTCC
ATCACTGTCA GTGGTGTCAA ATACGTTATA GACTCAGGAT TGAGAAAAGT TAAAGTATGG
AAACATCAAT TGGGATTATC TACATTATTA ACCACTCCAA TTTCACAGGC TTCAGCAAGG
CAAAGAGCTG GTAGAGCTGG TAGAGAATCT GCTGGTAAAG TCTACCGTCT TTATCTGGAG
AAGGTATTTC TGGATCTGCT TCCTAAGCAG CAGGAATCGG AAATCATGAG AAATGACGTG
GTGATGCCCA TCTTGACATT AAAGAAGTTA GGAATAGACG ACTTGTTGAA CTGGTCGTGG
TTGGAGCATC CTGGCCAGGA TGCTATCTTA AGTGCCTTGA ATACTTTATA TTCTCTTGGG
GCTTTGAACG ACAGCGGCAA GATTACACCT TTGGGATATA AGATGGCCGT TTTACCATTA
CAACCACAAC TATCAGTAGT TCTCTTAACA GCTTTTGAGT TTGGTGTGTT GTCTGCTGTT
ATAGATATTG TATCGTGTCT TTCCGTGGAC AACTTGGTAT TAAATGTAGG AGCTGCAAAT
GGCGAATTAC GAGACGAAGT CAACTACAAA AGACGCCAGT ATTGTCCTCT TGGTATCCGA
CATGGTGATT TGATTGGTCT TAAAGAGTAT TTCAATTACT ACCAAGAACT ATCTGCAGCA
GGAAATACGG GAGAACTTAA GTCGTGGTGC AAAGATTTGC ATTTGAGCTA TAAGGGCTTC
AAGAATGTTC TCAAAGTCAG ACAACAGTTG AAACAATATA TGATAACTAC TATCAAACAA
GATGATAGTA TCAAGAGGGA AGAAAGAGAC GAACAGTTGA AGAACTTAGA AGCTCAGCTA
GGCATAGTAA ACTTGAACAA CACTAACGAC AGCGACATTG AAGACGAGTT GAAGAAGCCT
TTGGATGTTC CAGCAGTTCT CAAGTCGTTC TTGAAGGGCT ACATCACGAA TACAGCTGTA
GGAATGCCGG ATAGATCGTA TAGAACGTTC AACACAGGTC AACTCATAAG TATACATCCA
TCTTCCAACC TTTTTGGTAA GCTGAACTTG GACGCAATAA TGTACATAGA GTACGTCTAC
ACGGCTAAGG GGTACGGGAG AAGTTGTTCT GCCATTGAAT TGGGTTGGAT ACAAGAAGTG
GCACCGCATA TTCTTGGAGC ATCCAAGATC AACGTGCACG ATTAG
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| Protein sequence | MQLPYSGDGS APASKKRKRK RNNKTKTKSD ADAHLSQEHA VANENNFQIH SSNKKFKFDT
EEKEDVINQK NNDSVEKGNF EHHEEEDEGE EIIEDAPEKE EQVEERIEDE EEDEDDEEEN
KIKTKNPRKN KDKKKHKKDV ELAKKAEQLL EFRKELPVYQ HKDEVIDYVT NNQVTVVIGE
TGSGKSTQIP QFLMPLNSKS IAVTQPRRVA AASLAARVSE EYGCQLGQEV GYQVRFSNIT
HPQKTKLKYL TDGMLLRELM IDSKLSKYST IILDEAHERT VLTDLIMGFL KQLIVTKTRR
DLKIIVMSAT LNAELFSKFF GNAPILFIEG KMFPVSPFYL SDSSEDIVDT MVRSVIQINL
AEQEGDILCF LPGQEEIDSC VTVLTQVAPL LPKQAPLLVP MALYAALSPA KQAKIFEKLP
ARRRKVILAT NIAETSITVS GVKYVIDSGL RKVKVWKHQL GLSTLLTTPI SQASARQRAG
RAGRESAGKV YRLYSEKVFS DSLPKQQESE IMRNDVVMPI LTLKKLGIDD LLNWSWLEHP
GQDAILSALN TLYSLGALND SGKITPLGYK MAVLPLQPQL SVVLLTAFEF GVLSAVIDIV
SCLSVDNLVL NVGAANGELR DEVNYKRRQY CPLGIRHGDL IGLKEYFNYY QELSAAGNTG
ELKSWCKDLH LSYKGFKNVL KVRQQLKQYM ITTIKQDDSI KREERDEQLK NLEAQLGIVN
LNNTNDSDIE DELKKPLDVP AVLKSFLKGY ITNTAVGMPD RSYRTFNTGQ LISIHPSSNL
FGKSNLDAIM YIEYVYTAKG YGRSCSAIEL GWIQEVAPHI LGASKINVHD
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