| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30587 |
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| Symbol | GCS1 |
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| ID | 4837896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 445403 |
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| End bp | 446509 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640389211 |
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| Product | Zn finger-containing GTPase- Activating Protein for ARF |
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| Protein accession | XP_001383716 |
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| Protein GI | 150864750 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.930878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTG ACCCAGAAAC ACGTAGAAAG TTGTTGCTTC TTCAGAAGAA CGGCGACAAC
AAGAAGTGTG CCGACTGCGG TGCTCCTAAC CCGCAATGGG CCTCTCCCAA GTTTGGTATC
TTCATCTGTT TGGAATGTGC TGGTATCCAC AGAGGCTTGG GTGTGCACAT TTCGTTTGTC
AGATCCATTA CTATGGACCA GTTCAAGCCT GAAGAGACGT TGAGAATGGA AAAGGGCGGG
AACGAAAAGA TCAAGACCTA CTTCACTGCT AACGGTGTCG ACTTGACTTT ACCAGCTAAG
GCTAAGTACG ACAACTACGT AGCAGAAGAC TACAAGGAGT TGTTGACCTG TGAAATTGAA
GGCAGGGAGT TCGTAGCCAA AGACCATTCC GGCAAGACTT TGCCCACTTT GGACAACCTT
TCCACAAGTA ACAACTCTTC TGCCAGCATA GCTCAGGAAC AGATCAGTTC CAGTAGAAAC
ACCCCTGTTT TGCAAGGGGA ACAGAAGCAG AAGAATGAAG CGTATTTCGC ACAATTGGGC
TCCAAAAACG ATCTGAGACC AGACCACTTA CCTCCTTCTC AGGGTGGAAA GTATGGCGGT
TTTGGAAATA CTCCTGCTCC CAAGCCTGCT GCTGGAGGTT CTCTCGCAGG CTTTACTCTT
GACAACTTGC AAGCCGATCC TCTTGGAACT TTTTCTAAGG GTTGGGGCTT GTTTTCGTCC
ACTGTGGCGA AGTCTGTCAA CGAAGTGACC GAAACTGTCA TTAAGCCAGG TATCTCGCAA
TTGCAAGAAT CTGATATCAC AAACGAAGCC AAAAGAGCCA TGGCTCAATT CGGCCAGAAG
ATGCAAGAAA CAGGCAAATA CGGGTCCGAG ACGTTTCAAA CATTCACCAC TGAGGTCAAC
GAAAGAGGCT TAAACAAAAC TGTAGAAGAC AAGTTCGGCA AGCTCTTCAA CAACTTGTCA
ATTAACCAAC AGGAAGAAAA GGTTCCTGCC GCATTTGGAT TCTCCAAACC TCAGGAAAAG
ACTTCATTGG GCAGTGTTAG TGGTGGATCC AAATTCGGAG GTGCTGCTAG CAAACACGAA
GATGACGACA AGTGGGATGA CTTCTAG
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| Protein sequence | MSIDPETRRK LLLLQKNGDN KKCADCGAPN PQWASPKFGI FICLECAGIH RGLGVHISFV
RSITMDQFKP EETLRMEKGG NEKIKTYFTA NGVDLTLPAK AKYDNYVAED YKELLTCEIE
GREFVAKDHS GKTLPTLDNL STSNNSSASI AQEQISSSRN TPVLQGEQKQ KNEAYFAQLG
SKNDSRPDHL PPSQGGKYGG FGNTPAPKPA AGGSLAGFTL DNLQADPLGT FSKGWGLFSS
TVAKSVNEVT ETVIKPGISQ LQESDITNEA KRAMAQFGQK MQETGKYGSE TFQTFTTEVN
ERGLNKTVED KFGKLFNNLS INQQEEKVPA AFGFSKPQEK TSLGSVSGGS KFGGAASKHE
DDDKWDDF
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