| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30460 |
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| Symbol | SMC5 |
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| ID | 4837901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 118225 |
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| End bp | 121506 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389216 |
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| Product | structural maintenance of chromosomes protein |
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| Protein accession | XP_001383656 |
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| Protein GI | 150864715 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.157057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA TATACCAAGC CATAGGCGAT TTGAGACAAT ATGTTGGTCC CAATGATTCT
GAATCTGTGG CTAAGCGTAG GAAAGTACAG AGTTCTCGTG ATTTCCGTCC TGGAAGTCTT
ATGAAGTTGA AGTTGACCAA TTTCAACAAC TACGGTAGTG GAGAGTTCAA TTTGTCTCCT
TCACTCAACA TGGTTATTGG TCCTAATGGA TCTGGTAAAA GTACTGTAGT TTCTGCGATC
TGTTTGGGGT TGGGTGGAAA GATTGATCTT ATTAAAAGAC AGACTCTTTC TTCCATGATT
AAGAAAGGAA AGTCCACAGC TTCAACTGAA GTTACAATCA AGAATTTTGA TGGTCAACCT
CCTATTTTAG TTAAAAGAGA GTTCACGGCA AAAGAAAACC GTTGGTATAT AAACCACAGG
CCGGCCACAG AAGCCAAAGT TAAAGAGTTA AGAGCTAGGT TTAACATCCA GTTGGACAAT
TTATGTCACT TTTTGCCGCA AGAGAGGGTA GCTGAATTTG CTGGGATGTC ACAAGAGAAG
CTACTTATGG AAACAGAAAG AACTTTAGGT GATGGCCAGT TGTACCGTCT TCATGAGGAT
TTGATCAAGA ACGATACTCT GAGACAAGAT GTGACTACAA GAATAGAAGA ACTTGAAGAA
AAGTTACTGA AATTCAACGA AGAAAGAAGT AGACTAGAAG CAGATATAAA GAAGCTTGAA
GAGTATGAAG GAAAGACTCT AGAGATAGAG CAACACACAA AGATAATTCC GTACGCCCAA
CTATCTGATC TCAAAAAACA GAGAGCAGAT TTAAAACGAG AGAGAGACAA AGCAAAATCT
AAATTGTCGA AGTTTTTATC TTCCATGGAC CCTTTGAAAG ACCAGCATAA AGAAATAGAA
ACCAAAGTTG AAATGGAAAA AGGACTATAT TCCGATATAG ATGACAAGCA AAAGGAAATA
CGGTCTAGGT TTATCAATAG AAAGGCAGAT TTATCGAAAA TTAAGGAGGA AATCGGAGGC
TTGAAGTCAA CGGTTGAGTC TTTGAAGAGT AAATCGATCA AATTGCAGAA TCAATTAAAG
AAACTTGAAG AAAAAAGGCA CGAATTGATT TCACAACGTG ACTTGATAGT ATTACCTGAC
AAAGATGAGG TTGAAGGTTA CAGAAAATTG CGAAGGGAAG TGTCTGAAAA GAAGGATGAA
ATAGGAAGCA AGATTGAAGA CTTGGAGGAC AAAATTCAAG AAAAGCAATC GTCACGAAAA
GAAATCATGA ACAATAAGAA GCGAGTAGAG CAGAGTTTAA ACAGTAAAGA TAGACTAATG
GTCCTTTCTC CAAGAGGGGG GCCGCCAAAC TCTTTGAGGG ATGGGGCATA TAATGCACAC
AAGTTTCTCA GAGATGAAGC TCAGTTAAAG GACCATTATT TTGAGTCGCC TGTGGTTTGT
TGTACTGTAA CAAACAAAAC AATGGCCCCA CACTTGGAAA AGGTGATTGA CAACAATACG
CTCTTTTCAA TTACCACCAC TAACAAACAA GATTTCAGCA TGATCTCTTC TTTTCAAAGG
AAGATGAAGA TAAATTTCCC AATTAGATTA ACAACCAACC TGGGTACACG AAATCCACGT
ATTCCCAAAG AAAGATTAAA GCAATGGGGG TTCGAATGCT ACTTGTCAGA TTTTCTTTCG
GGTCCAGGGC CAGTGGTAGA TATGATATAT GATATATCAA AGATTCAGGA TATTCCCGTG
AGTAGAAGTG GATTATCAGA AGAGCAGATC GAACGATTGA CAATGCTAGA TGGAAACGGG
AGATACCCTT TCAAGAAGTT TATTTCTCAT GATACTCTAT TTGTGTTGAC TAAATCGAAC
TATGGTCTGA ATCAAGTTTC TTATACTACG GAAAAGGTTA CTGGATCTAG ATGGTTCGAT
TCATCAGGAT TGACTCAAGA AGCTAAAGAT TTCATGAATG GTCAGTTACA GGAATTTAAG
GACAGGTACA ACGTTTTAAA AGGCGAAGAA GATGGATATC TTGTTGAGAA GCAAAGTCTC
GATTCAGAAA GTCGTAAACT TTCGGCTGAG CTTGAGAAAT ATAAAAATAA AATTCAGCAT
TTCACCAATG AAACGAAAAA CAGGGCAAAA ATAGAAGGAA AGTTAACGGC TCTTGACGCG
CAAATCAAAA AGACAACAAA GGAATCTACA GAAGACACAA GTGAACAAGT TGACGAAACC
GAAGAGAAGA TCAAATCAAA GTATTTGGAT TATTCAAACA AGTTATCGGA GCTTAGTATC
ATTGGTAAGG AATCTAGCGA TGTTGCTATT GAGCTAAGTT TGCAATCATT TAGAGTGCTT
CAAATCAGAA ACAGAGAGAT CGCGGCCCGG AATCTAATTG CTAAAGTAGA AGAACAACAA
GTTTCATTAA GAAAGGAGTA TGAAAGATTG AAAGCAGAAT ATGACCAAAT TAAGAAGGGG
GATGCTGTTA AAAAGATCGA AGAACAGAGT GCTTCGTACA CTCCGGAAGA AAGAGTACTA
TTGTCTAGGC TTGCCAAGGC ATATATGGAT GCTGGTAACT TCTCAGAACA GGTGATAAGA
GACAAAATAC TGCTTTTAGA AGACGAGCGG TCTGTGATGG CTACTGCTGA TGTGAGTTCC
ATCGAAAGAT TACGGAGGAC CTTGACTGAA ATTGATTCAC TCGAGAAGAC TCTTCCAAGG
TTGAAGGACG ACAAGTCTAA ATTGGACAAA AGAATTAGTG ATATTCAAGA AGCATGGGAA
CCAGAGCTAA CTAAGGCAAT TCGGAATATT TCATTAGCAT TTAACAAGCG ATTCTCCAGA
GTCGCAAGCG ATGGACAAGT AGAATTAGCC AAAGCAGAAA GATTCAAAGA TTGGAAATTG
CAAATTCTAG TTAAATTTAG ACAAGAGTCA GAGCTAAAGG TTTTGGACCA CCAATCACAA
TCTGGAGGGG AAAGAGCAGT AACAACTATC TTTTTCATGA TGTCTTTGCT GGGATTAACA
AATTCTCCAT TTAGAGTTGT GGATGAAATC AATCAAGGGA TGGATCGAAA GAATGAAAAG
ATGGCTCACA GGTACTTGGT GGACACGGCC TGCCATAGTT TGAGTTCACA GTATTTCTTG
GTCACTCCCA AGCTTTTGAC AGGTCTCTAT TATCATCCTG AAATGGCAGT TCATTGCATT
TATTCTGGTC CTTTGGTCGA CGGAACAGAT AGAGGAAATA AGGAACCTGA TTTCATGGAC
TTCAAAGCAA ATTCATTAGC GCAGAAATCT ATATATACAT GA
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| Protein sequence | MTDIYQAIGD LRQYVGPNDS ESVAKRRKVQ SSRDFRPGSL MKLKLTNFNN YGSGEFNLSP
SLNMVIGPNG SGKSTVVSAI CLGLGGKIDL IKRQTLSSMI KKGKSTASTE VTIKNFDGQP
PILVKREFTA KENRWYINHR PATEAKVKEL RARFNIQLDN LCHFLPQERV AEFAGMSQEK
LLMETERTLG DGQLYRLHED LIKNDTSRQD VTTRIEELEE KLSKFNEERS RLEADIKKLE
EYEGKTLEIE QHTKIIPYAQ LSDLKKQRAD LKRERDKAKS KLSKFLSSMD PLKDQHKEIE
TKVEMEKGLY SDIDDKQKEI RSRFINRKAD LSKIKEEIGG LKSTVESLKS KSIKLQNQLK
KLEEKRHELI SQRDLIVLPD KDEVEGYRKL RREVSEKKDE IGSKIEDLED KIQEKQSSRK
EIMNNKKRVE QSLNSKDRLM VLSPRGGPPN SLRDGAYNAH KFLRDEAQLK DHYFESPVVC
CTVTNKTMAP HLEKVIDNNT LFSITTTNKQ DFSMISSFQR KMKINFPIRL TTNSGTRNPR
IPKERLKQWG FECYLSDFLS GPGPVVDMIY DISKIQDIPV SRSGLSEEQI ERLTMLDGNG
RYPFKKFISH DTLFVLTKSN YGSNQVSYTT EKVTGSRWFD SSGLTQEAKD FMNGQLQEFK
DRYNVLKGEE DGYLVEKQSL DSESRKLSAE LEKYKNKIQH FTNETKNRAK IEGKLTALDA
QIKKTTKEST EDTSEQVDET EEKIKSKYLD YSNKLSELSI IGKESSDVAI ELSLQSFRVL
QIRNREIAAR NLIAKVEEQQ VSLRKEYERL KAEYDQIKKG DAVKKIEEQS ASYTPEERVL
LSRLAKAYMD AGNFSEQVIR DKISLLEDER SVMATADVSS IERLRRTLTE IDSLEKTLPR
LKDDKSKLDK RISDIQEAWE PELTKAIRNI SLAFNKRFSR VASDGQVELA KAERFKDWKL
QILVKFRQES ELKVLDHQSQ SGGERAVTTI FFMMSLSGLT NSPFRVVDEI NQGMDRKNEK
MAHRYLVDTA CHSLSSQYFL VTPKLLTGLY YHPEMAVHCI YSGPLVDGTD RGNKEPDFMD
FKANSLAQKS IYT
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