Gene PHATR_50770 details

Gene Information

• Locus tag: PHATR_50770
• ID: 7203857
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 903287
• End bp: 905335
• Gene Length: 2049 bp
• Protein Length: 549 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002186151
• Protein GI: 219113135

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGTAG AATATAGAAT CGCGAACGGG ATTTGTATGC GATTTCGTTT CGAACGTTCC 
ATACCATTGT CTGGCATGGA CCCGCTGCCA GACAGTATGA GGTGTCTCGT ACTCCTCATG 
ACTGTGAGAA CACCTATCAC ACGCGCTTCT TGTCTGATTC ACTGTCAAGC CAAGACGATC 
TTTCGACCAT GAAGATTTCG ACGACGTTCC TCTGATGCAA ATCAGCTCAC TTGCTGTTAC 
ACCACAGTCT TTTTACTGTC ATTTCACCCT TTCTCCTGCC GTCATTGTTA CAGCATGGCG 
GAGACACACG AAGTGAAAGT CCAAGTATTT GACAATGTCT TAAAAGAAGA TTACTTGAAG 
AACTTTACGC CCATCAAGAA CAAAAAGAAG AAAAAGAAAA ACAAGGAAAA TCCCAACAAA 
CTTGTGGGGG CCATCGACCA AGGCACTTCT TCTACTCGGT TTGTTGTATT TACCACAAAA 
GGCCGGATTG CGGCATCTTC GCAAATGGAA CACACGCAGA TATTTCCGGA ATCAAACGCC 
GGATGGCACG AACACGACCC GGTCGAGATT TTCCGCAACA CGGCAACCTG CATTCAAGCA 
ACGCTGCAGG CGCTCGAACG GAAATCCTAC GCGGTATTTC TTTCCGCTGT AGGCATTACC 
AATCAGCGGG AAACGACTAT TGCGTGGAAT CGAGTCACCG GGGTACCTTA CTACAACGCC 
ATTGTCTGGG ACGATACAAG GACCACGGGT ATTGCCAAAG CGATCGCTCA GGGTAACTCG 
AATCGCCTGC GAGATCAGAC AGGCTTACCG TTGGCAAGTT ACTTTGCAGG TACAAAAGTC 
AAGTGGTTAT TGGACAACGT CGAAGCCTTA AGAAAGGACT TGGAAGACGA TGCGAAGTCT 
AGCGAAGTTT GTTTCGGAAC TATCGATTCC TGGTTGGTTT ATCAACTTAC TGGCACCAAA 
TCTAATCACG ACGGTGCAAT TAACTCGGGA GGAGTCTTTG TGACGGACGC TACCAATGCA 
TCCCGTTGGT TGTTTATGGA CTTGGCAGCC CGTGTGTGGG ATCAGACTTT GGTTAACGCC 
GTTTGTGCGC CGCATAGAGT TCCACTTTCG GCATTGCCGG AAATCTGCCC CAGTAGTCAC 
GTTTACGCAA CCTGTAAAGG AATCGAAGTA GGTGTTCCCG GTCTCGACAA AGTTCCCTTG 
GCAGCCATCT TGGGAGATCA ACAGGCCGCT CTCTTTGGGC AGACTGCCTT TGCTCCAGGA 
GAAGCCAAGA ATACCTATGG TACCGGTTTG TTCCTCATGA TGAATACCGG GACTAAAATC 
GTTCCGTCTA AGCATGGTCT CTTGACCACT GTCGCTTACC AAATTGGGCA AAATGCCCCC 
GTTCAATACG CTCTTGAAGG CAGCGTCTCC CATTCGGGTA GCACTATTCA ATGGCTCCGC 
GATCAGCTTC AAATCATAAA AGATGCGCCA GAATCTGAAA CCATGGCGAG AACGTGTGAC 
TCCAACCAAG GCTTGTATTT TGTACCGGCA TTTTCGGGAC TCTTCGCCCC GCATTGGCGT 
TCAGACGCTC GCGCGTGCAT TGTGGGAATG ACGGCTTCCC ACCACAGGGG GCACGTGTGT 
CGGGCCGCCC TCGAAGCTGC AGCGTACCAA ACTCACGAAG TCTTCGCCGC GATCGAAGCA 
GATTCTAACG TGACGTTGCG GACACTCAAT GTGGATGGGG GCGGAACACA CAATCAATTA 
TTGATGCAGT TCCAAGCGGA TATTATTGGT GTACCAGTGG TCAAACCTGC CGTTATGGAA 
ACCACATCAA TGGGTGCTGC GTTTGCCGCC GGTTTGGCAG TGGGAATCTG GCAGGATCAA 
CAGGAAATCA AAGAATTATG GACTGCAGCT CAAACATTCA ATCCAAAAAT GGATGTTGAA 
GAACGAGACT CTTCCCTCGC GGGCTGGAGA AAGGCAGTTT CCAAAAGCCT CGATTGGGTA 
GGTGAAGACC AGGACGCAAA GAAAGAAGAT ATCTGGTTGC TATGTCCGAT GAATCGGAAC 
ATATTTTAA 

 

Protein sequence

MNENPNKLVG AIDQGTSSTR FVVFTTKGRI AASSQMEHTQ IFPESNAGWH EHDPVEIFRN 
TATCIQATLQ ALERKSYAVF LSAVGITNQR ETTIAWNRVT GVPYYNAIVW DDTRTTGIAK 
AIAQGNSNRL RDQTGLPLAS YFAGTKVKWL LDNVEALRKD LEDDAKSSEV CFGTIDSWLV 
YQLTGTKSNH DGAINSGGVF VTDATNASRW LFMDLAARVW DQTLVNAVCA PHRVPLSALP 
EICPSSHVYA TCKGIEVGVP GLDKVPLAAI LGDQQAALFG QTAFAPGEAK NTYGTGLFLM 
MNTGTKIVPS KHGLLTTVAY QIGQNAPVQY ALEGSVSHSG STIQWLRDQL QIIKDAPESE 
TMARTCDSNQ GLYFVPAFSG LFAPHWRSDA RACIVGMTAS HHRGHVCRAA LEAAAYQTHE 
VFAAIEADSN VTLRTLNVDG GGTHNQLLMQ FQADIIGVPV VKPAVMETTS MGAAFAAGLA 
VGIWQDQQEI KELWTAAQTF NPKMDVEERD SSLAGWRKAV SKSLDWVGED QDAKKEDIWL 
LCPMNRNIF