Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_56448 |
Symbol | |
ID | 7196067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 282168 |
End bp | 282922 |
Gene Length | 755 bp |
Protein Length | 205 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | fucoxanhin chlorophyll binding protein related |
Protein accession | XP_002177056 |
Protein GI | 219110609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCTGCACC ATTTGTAGTG TTGCGAAGGA TTAATACAGG TCATGATATT GCACCAATGA AAAAGATTTT GAAAAGATCC ACAATTTGCT GCTGTCTCGG ATTATATACG GGATCTCCGT GTTCTTACGC ATTTCGACCT CCTCCAATCT CGGAAGAAAT TGGCTGCAGT CCTACCCTGG CAATCTTTCT CAAAGAGGAT TGCCACTTTT TCGACCCATT AGCACTGGCA AACGATGACA ATTTCTCTCG ATTCCGGGAA AGTGAATTGA AACATGGACG AATTGCTATG TTGGCCGTGG TGGAATCCAT TGTCACGCCT TTGCTACGGA AATCAACTGA CTGGGTGCCA AAGAAGTTGC CCGACAGCAT TTTGAAGAAG TTCCAGATCC TCAACGCCGA GGACATTGTA AGGGTTGTGG TGTTGTGTGG CATACTCGAA ACACTGGTTT TTGTCCAACG AGACCCCAGA GACATGCCGG GGGATTACGC TACTGGATAC TTCTTTGTTC GAGACAAGGC TCTGAACGAG CGCAAATTGA CGGTCGAGCT AGAAAATGGT CGGCTTGCCA TGATTGCTTT TGTAGGTCAA ATTGCGGCAG AGTTTGCAAC CGATCAATTG AGCTGGGAAG AGCAGTGGCG CGGGATCCTG AAAGGATGGC TGGATGCAGT CTGAAAATTG CCCGGAAACC ATGGGTTGCG CGCGTCATCC GTTTGCACCT GAGATTGGCA TTTTGCCACT CTTTTTTCTT AAACC
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Protein sequence | MKKILKRSTI CCCLGLYTGS PCSYAFRPPP ISEEIGCSPT LAIFLKEDCH FFDPLALAND DNFSRFRESE LKHGRIAMLA VVESIVTPLL RKSTDWVPKK LPDSILKKFQ ILNAEDIVRV VVLCGILETL VFVQRDPRDM PGDYATGYFF VRDKALNERK LTVELENGRL AMIAFVGQIA AEFATDQLSW EEQWRGILKG WLDAV
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