| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47273 |
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| Symbol | APC2 |
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| ID | 7202316 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 150001 |
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| End bp | 152502 |
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| Gene Length | 2502 bp |
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| Protein Length | 767 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181491 |
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| Protein GI | 219122312 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.662856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCACATCCAT TCTGGTGAGG CAGAGTGATT CTCTCATTGT ACCAAATTGA TAGATAGATA
CACACTGTGC ACCAGCGTTC CATTCTAACT ACAATGGCGA CGGTTACATC TTCAGCCGAC
CGTGCGCCAG AGGCTTTATG GAGGGACGAA TTTCGGCACG GGTTTGGGTC TGCGGACGCG
GCTCACGCAG TTCGCACTCG ACCCACGACG GTGGCAGCGG TCGAATTCGC CGCGGATGGT
GGTGATTGGT GTACCCTTCC GGAACGGGTC GCCGCGTTGG CGGCACACGT CCAACGTTGG
GTACGTTGAA ATACAGAGTT ACATGTGTAC GAAACCACAC ACGCCAAAAA AAGCTTAACT
CACCGCAGTT TTCGATTTTT ATGCTCGTCT GTCGGAAATG GACAGGATTC ACTGGGTGCT
ATTCCGGAGA ACTCTTCCGA GTGGACGTAT GCCTTTGGCA GTACACCTCA AGAATCGAGA
ATCATGGCTT TGACGGCAGC CGTCCGAGTC ACTGTACCTC AACAGATATT GAATCGGCAG
TTTTCATGCT ACTTGCAAGC GTCTCTGGAT TACTGTTGTC GCACTCGATT GGGCGAGGAA
ATGGAAGGGG AAGAGGAGAG CGTGAACGGT GACGAAAAAT ATCTCAACGA CGCTCTTTTG
TTTAACAGCT TGCGTGTTCT GGGATGGCTG AGAGTGCCTC GCCGTATATT CTGGACGGAG
GAACTGAAAC TCGCATTGCG CCGGAAAATG AAACAGTACG TCCGCGATGT AATTACGGGA
GACTACGAAG CGTCCGGACG GTTCGAAACC TTGCGTTGCT GGAAGGATCA GACTATTCTG
CCCTGGTTGC AGTCAGCCCT GATCATTTCA TCGTTGACTG ACCCCGAAGA GGAGCAAGAA
ATGGAACGCT GGTCTCAGCG TTTGCAACAT TGGCTCGCGG ATACCTATTG TGAGGTTCGG
AACGAGGAAA TCTTTGAACT CGTGGCAGAT TATCCCGATT CGCACGAGGC AGTCTTGGAA
CTCCGGTACG TTCTTCAGCA ATCGAATTGC GGCTCCCATG AATTCCCCAC ACTGCAATTA
CCATACGAAC GACTCCGAAA CGCCCTGAGG AGTGCTTTGG TCCGTCGGGT TTGTCACGCA
GGCGCTACGA CTTCCCAAAT CATAGACGTA TATATTGCCA CAATCAAGGT TATGCGTGTT
ATGGACCCGT CCGATCGACT CTTGCAAGTC GTTGCCGAGC CCGTCCGGCT GTATCTTCAG
ACACGACTCG ACACTGTCCG TTGTATAACC ACCAGTCTGA CGGATGCCGA TCAAGGAGGA
GAATTGTACG AAGAATTACG TCGTCAAGAT GCCAAGCCAT TAGAGCATGT AACGGTGGAT
TCGGATGACG AAGAAGAACC ACCCACGATG GATTGGCAGC CACGACCTTC AATTCATCAA
CCCAAAGGCA CCTTTTTGGA AACTTTGTCG ACGAACAACA ATGCGGATGG TGATATTCTT
GCCATGCTTG TGAGTATCTA TGGAAGTAAG GACCTCTTTG TGAATGAATA TCGCTTGATG
TTAGCGGATA AACTCCTCGC CAGCGTCGAT TACAATACCG ATAAGGAAGT GCACACTTTG
GAGTTGCTTA AGTTACGGTT CGGTGAATCG AGTATGCGTA ACTGTGAAGT CATGATCAAA
GATATGGATG ATAGCAAACG CGCCAACACC AATATTCAGG GGTCGTTGAA ATCTCGGGGT
ACGACGTCAT CGACGGTAGA CGCCGCCATT ATTTCTCATA TTTTCTGGCC GACACTGCAT
AGCGATAGCC TTGTACACCA TCCACGGATA CAGGTGAAAC TGGACGATTT TAGTACCATG
TATGCCAACC TTAAGAACCC GCGCAAACTA GTTTGGATGC ATCAACTTGG GACCGTGCAG
TTGGAGCTCG ATGTGATTGA AGACGGTCCC AATGGTGAAC CCGTCATCAT GACCAAAGAG
TTTTCTTGTT CCCCGTTGCT GGCTACCTTG ATTTCGCATT TCGAAGACCG GACGGAATGG
ACTGCCGAGG ATCTCTCCAA CGAAACTGGT GTGGCGTCAC ACGCCATAAA AAAGCGGATG
ATTTATTGGA TAAACCATCG GGTAATAACT GTGCACATCA CGCCTGCAGG AGTGACGGTG
TACAATTTAG CAACTTTGGC TAGTCACGAA GAAAATGACG CGCACGGGTC TCCCCAACAT
TTGGCCTCAG AGGATGATGA CCTTCACGAC CATACAGTGT CCATCTCGGC CCAGCAGGAT
CAAGAAATGG ACGTTTTCCT TTCCTACGTG GTTGGTATGC TTACCAATCT TGGACAGTTG
CCATTGAAAA CAATCCACAA CAATTTAAAA ACCTTTGTCA CAGGCTCCGA CGTAAGATAC
GACAAGACAC CCCAACAACT GAGTGCCTTT TTGCAAAATC TGTGTCGACA AGAACGTTTA
GAGTGCGGCC CCGATGGAAT GTACAAGTTA TTTAAAAAGT AA
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| Protein sequence | MATVTSSADR APEALWRDEF RHGFGSADAA HAVRTRPTTV AAVEFAADGG DWCTLPERVA
ALAAHVQRWD SLGAIPENSS EWTYAFGSTP QESRIMALTA AVRVTVPQQI LNRQFSCYLQ
ASLDYCCRTR LGEEMEGEEE SVNGDEKYLN DALLFNSLRV LGWLRVPRRI FWTEELKLAL
RRKMKQYVRD VITGDYEASG RFETLRCWKD QTILPWLQSA LIISSLTDPE EEQEMERWSQ
RLQHWLADTY CEVRNEEIFE LVADYPDSHE AVLELRYVLQ QSNCGSHEFP TLQLPYERLR
NALRSALVRR VCHAGATTSQ IIDVYIATIK VMRVMDPSDR LLQVVAEPVR LYLQTRLDTV
RCITTSLTDA DQGGELYEEL RRQDAKPLEH VTVDSDDEEE PPTMDWQPRP SIHQPKGTFL
ETLSTNNNAD GDILAMLVSI YGSKDLFVNE YRLMLADKLL ASVDYNTDKE VHTLELLKLR
FGESSMRNCE VMIKDMDDSK RANTNIQGSL KSRGTTSSTV DAAIISHIFW PTLHSDSLVH
HPRIQVKLDD FSTMYANLKN PRKLVWMHQL GTVQLELDVI EDGPNGEPVI MTKEFSCSPL
LATLISHFED RTEWTAEDLS NETGVASHAI KKRMIYWINH RVITVHITPA GVTVYNLATL
ASHEENDAHG SPQHLASEDD DLHDHTVSIS AQQDQEMDVF LSYVVGMLTN LGQLPLKTIH
NNLKTFVTGS DVRYDKTPQQ LSAFLQNLCR QERLECGPDG MYKLFKK
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