Gene PHATRDRAFT_45195 details

Gene Information

• Locus tag: PHATRDRAFT_45195
• ID: 7200230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 454387
• End bp: 455185
• Gene Length: 799 bp
• Protein Length: 253 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002179217
• Protein GI: 219116845

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.177256
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGATGGGTA TTTTCCAATG ATAGCAAAGG TGCCCTCGAC TGCTGTGCGC ACTCAGCTAG 
CACCGACCGG TGTGCTGCGG GCGGCCATCA ATCTGTCCAA TTTTTTGTTG GTGGTTGAGC 
GAGAACCCAG CCCACGCGGA CCGTCCCCGC GTCTCGCACA AGCCGTGGCG GAGGCCTTGG 
GTGTTCCGCT GCAGCTCGTT TTATTCGAAA CCCCGAGTGA GGTAGCCGAG GCTGCCAAGG 
ACAATGTCTG GGATGTGGCC AATATCGGTA ACGAACCCCA GCGTGCCGAG CACATTGACT 
TTACTTCCGC CTACGTTGAG ATCGCTGCGA CATATCTAGT CCGGAAAGGA TCCAAATTAA 
AGACTGCTAC GGACGTCGAT TGTCCCGGAA ACCGGGTGGC TGTGAAAAAA GGTTCGGCTT 
ACGGTTTGTG GTTGGAAAAC AATATGAGCA CCGCCGAGCT AGTCGCTTTG CCGGGAAGTG 
ACGATGAAGT ATTCGCCGCC TTTGCCGGAC AGCACTTTGA TGCCCTTGCT GGCCTTCGAC 
CGGGTCTTCT AAAACAACAA TTGAAACTTT CGGGATCAAA AATTACGGAG GGTCATTTTA 
CGGCAGTCCA GCAGGCCGTT GGTTTGCGGA AAGGAAGACC CGAAGCTTTA GAATGGCTCC 
AGAATTTCGT TGAAGATGCC AAACGAGACG GATTAATCGA GAGTTGGATC CAATCGTATG 
GACTACAAGG AAAGCTATCA GTTGCACCAT TAGAAAGCCT TTGCCAAAGG AGCCTGTAGC 
AGAGCACAAC ACCCAAACC 

 

Protein sequence

MIAKVPSTAV RTQLAPTGVL RAAINLSNFL LVVEREPSPR GPSPRLAQAV AEALGVPLQL 
VLFETPSEVA EAAKDNVWDV ANIGNEPQRA EHIDFTSAYV EIAATYLVRK GSKLKTATDV 
DCPGNRVAVK KGSAYGLWLE NNMSTAELVA LPGSDDEVFA AFAGQHFDAL AGLRPGLLKQ 
QLKLSGSKIT EGHFTAVQQA VGLRKGRPEA LEWLQNFVED AKRDGLIESW IQSYGLQGKL 
SVAPLESLCQ RSL