Gene PHATRDRAFT_45195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45195 
Symbol 
ID7200230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp454387 
End bp455185 
Gene Length799 bp 
Protein Length253 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179217 
Protein GI219116845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.177256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGATGGGTA TTTTCCAATG ATAGCAAAGG TGCCCTCGAC TGCTGTGCGC ACTCAGCTAG 
CACCGACCGG TGTGCTGCGG GCGGCCATCA ATCTGTCCAA TTTTTTGTTG GTGGTTGAGC
GAGAACCCAG CCCACGCGGA CCGTCCCCGC GTCTCGCACA AGCCGTGGCG GAGGCCTTGG
GTGTTCCGCT GCAGCTCGTT TTATTCGAAA CCCCGAGTGA GGTAGCCGAG GCTGCCAAGG
ACAATGTCTG GGATGTGGCC AATATCGGTA ACGAACCCCA GCGTGCCGAG CACATTGACT
TTACTTCCGC CTACGTTGAG ATCGCTGCGA CATATCTAGT CCGGAAAGGA TCCAAATTAA
AGACTGCTAC GGACGTCGAT TGTCCCGGAA ACCGGGTGGC TGTGAAAAAA GGTTCGGCTT
ACGGTTTGTG GTTGGAAAAC AATATGAGCA CCGCCGAGCT AGTCGCTTTG CCGGGAAGTG
ACGATGAAGT ATTCGCCGCC TTTGCCGGAC AGCACTTTGA TGCCCTTGCT GGCCTTCGAC
CGGGTCTTCT AAAACAACAA TTGAAACTTT CGGGATCAAA AATTACGGAG GGTCATTTTA
CGGCAGTCCA GCAGGCCGTT GGTTTGCGGA AAGGAAGACC CGAAGCTTTA GAATGGCTCC
AGAATTTCGT TGAAGATGCC AAACGAGACG GATTAATCGA GAGTTGGATC CAATCGTATG
GACTACAAGG AAAGCTATCA GTTGCACCAT TAGAAAGCCT TTGCCAAAGG AGCCTGTAGC
AGAGCACAAC ACCCAAACC
 
Protein sequence
MIAKVPSTAV RTQLAPTGVL RAAINLSNFL LVVEREPSPR GPSPRLAQAV AEALGVPLQL 
VLFETPSEVA EAAKDNVWDV ANIGNEPQRA EHIDFTSAYV EIAATYLVRK GSKLKTATDV
DCPGNRVAVK KGSAYGLWLE NNMSTAELVA LPGSDDEVFA AFAGQHFDAL AGLRPGLLKQ
QLKLSGSKIT EGHFTAVQQA VGLRKGRPEA LEWLQNFVED AKRDGLIESW IQSYGLQGKL
SVAPLESLCQ RSL