Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44461 |
Symbol | |
ID | 7197696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 635064 |
End bp | 636285 |
Gene Length | 1222 bp |
Protein Length | 357 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178546 |
Protein GI | 219115501 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.844276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGAACATCT ATTTTGTCAT TAAGACCATG AATGAGGGAT CGTCACCAAT TGCGCAGTCT AGTGACTGCG AATACTTCGC CTTGGAGAAT GATGAAGGTA TGACCCGGGT AGAGTCAGGA ATTCTATCCC CGGTTCCATT TCGCGACGAA GCGGGGTTTC GCAACGAAGA GTCCGTACGA CTGGTGTTCG ACGAAGACAA TACTCTGCCG TCAAGGGAAG CCTTTCCGCG AAGCCCGTTT CTAGCTAGAC GGGAGCCCGC CGAACTGAAT GGGCTCAATT ACTTGAATGT GGTGACGTAT GCTGCCCACC TTTTTGTTTC TTGGGGAATC GGGGTCTGGG GTTTACACGG AATTCTAAGA ACAAGATGGG AGCTAAGTCT GCAGTACGAA ACACTCGTCA TGCCTGCCCA TTGGGCGTAC TACCTCTGGG GACCTATATT GATACTAGAG GGAATCTTTG CGCTGGCTCA ACTTTTTCCT TACTACCGTG CAAGACCGAT AATTCAAGCT GGTTCGGGGT ACTTTTTCTT CTATACGTTT CTGCTCCAAA CAGCTTGGAC ATTTTTCTTT TGCTTCCAGC TGTTCATATG CTCCTTTGTT GCAGTTACTC TGACTCTTCT ATCGTTATTA GGACTTTTGG CTTCTCAGCA AAAGCATCGG GTTCCGTCGG GCCGTTCCAG TCGCGTTGAA TATGCCCTCT TCAGGTTTCC GTTTTACTTG CACACCGGAT GGATGGTACT GATGGCGGTG GATCATTTTG CCCTACTATT TCGTAAGCTT AATGCAAGTC TAGGTTTACA AGTCGCGGCG GACATTTTTT CACTGGGTAT TCTTATGGCG GTGGCCGCTG CCTATCTGGT TCGTCCCTAC AAGGCCGGTT GGGTTATTCC AGCTGTCATA CTGTGGTCTT ATCTTGGGAT TGCCTGGCGA TTGCACACCC CGAGCGATGT CATGATGGCT CTGTATGGCG ACACCATAGT CTCAGCCGTT CGCTATTCCG TCTTTTTTTT CGCCGGAGCA GTTAGCTGTT GTCTTGTCCC AAATACTGTT GTTTGGGCGG CACACGAATT TTTGACAATT AATGTGATTG AGCTGGACTA AGGTAACAGA AAGCAGATGA TCACCCTCCC TCCTGTACGA GTATGAATAC AGCATTACGA CTTAAAAAAG TCGAATCTAT AAACAGCAGC CTCAATTTTA ATAAAAAGAC TGTTTTCGTT TG
|
Protein sequence | MNEGSSPIAQ SSDCEYFALE NDEGMTRVES GILSPVPFRD EAGFRNEESV RLVFDEDNTL PSREAFPRSP FLARREPAEL NGLNYLNVVT YAAHLFVSWG IGVWGLHGIL RTRWELSLQY ETLVMPAHWA YYLWGPILIL EGIFALAQLF PYYRARPIIQ AGSGYFFFYT FLLQTAWTFF FCFQLFICSF VAVTLTLLSL LGLLASQQKH RVPSGRSSRV EYALFRFPFY LHTGWMVLMA VDHFALLFRK LNASLGLQVA ADIFSLGILM AVAAAYLVRP YKAGWVIPAV ILWSYLGIAW RLHTPSDVMM ALYGDTIVSA VRYSVFFFAG AVSCCLVPNT VVWAAHEFLT INVIELD
|
| |