| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42758 |
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| Symbol | |
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| ID | 7196135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1007388 |
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| End bp | 1011488 |
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| Gene Length | 4101 bp |
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| Protein Length | 1346 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176706 |
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| Protein GI | 219109906 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.59748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA CACCGGTATC CCCCACTCCG GTGGAACCTA ACGATGCCGA CGACGAACCC
GTTATGCCTT CGTTCCATAT CCCCATTCGA TCATCCATCC AATTTCCCGA CAACGACAGT
CTGCACCATG CGCGATTCAT TGAAATATTT CCGGAAGAAA TGAGAGATAC CCCCGTCTCG
ACACTCCTGC ATGTGTTGAA GGACGAATCG GCCGAACTGT CGACTTGGGC CGACGCCGGA
TGGCACTATA TGGTACAAAA AAAGAACCGC GAGAGCTTGA CCATTCTGGA AGAAGCCTGC
GACACCACCG CTGCTACAAC AACAACGACA CCAAGCAACG ACGTGGACAA GACGGAACGC
GTGCGCATTC TCGCCGCGAC CGGGATTGCA CACTTGTCCA GTAACGGAGC CGCCGATGCC
ACTTCCGGCA ACACCGCCAA ACGTTCCAAC GTCCTCGATG AAGCTCGCCA ACAGGCCGAT
CAAAAGTTTA CCCAAGCGGG AAAGATTGAT CCCTTCTTTC CCATGACCTG GATTGGCCGC
GGTATGCTCA ATTTGTGGCA AGGAAAACAC GATCAGGCGA CATTTTTCTT CCAAACCACC
TTGAAGCAAT GTGGCCCCGT TTTGCCGGCC TTGCTCGGCA CGGCTGCCGT GTCTTTTGCT
CAAGGAGACT ACACCGCGGC GCAAACGGCG TACGGACAAG CGCTCCGAAA GTACCCCCAT
GCCAGTGGGG CCGCCTCCCG CGTAGGATTC GGACTCGCCT CCTACGCACT CGGACAAGTC
GACCGCGCCA AAGCAGCCTT TCGACGAGCC ACCGCCATTG ATCCAGAAAA TGTGGAAGCC
ATGGTCGGTA CGGCCATTCT CGATATGGCC AGCGTCGACG TGTCGGACAA AGACTACGCC
GCCAAAATGG AAGAAGCGAT CCGCGTCATG TCCATGGCCA ATCTACTCAA TCACGAAAAC
GCCATGGTGC AGAATCATTT GGCGAATCAC TACTTTTGGA AATGGACTCC TGTGAACGGC
ACGGTGGAAG TGACCAAAGG ATCGCAGTTG GTTCAAATGC CGTCGCAAGC CGTGCCCTTG
GAACCGGGAG AACGTATACG GATCGGAACC AAGTTTGAAA CCACCGTTCA AGATGTTGAG
GACGATAGTA ACAACAACAC GGCTTCGACG TTTACCGTTA CCGACAGTTG GAGCGAAGGC
TCCGCGACTG GCCTCAAGGT CTGGAAGAAG GACTACGATC GCGTAATTGC CTTGGCGAAA
GGAGCCTACG GTAGTACCAA CGTTCAGTCC ATGCAGGCCG AATCTCTATT CTTCCTCGCG
CGGGTCTACC ATGTGCGAGG GGAAACCGAC CACGCCCTCA AATTTTACGA AAAGGCCTGT
AAACTGGCGC CAGCCTTGAC CCCGGCGCGG TTTGGATTGG CACAAACATT AATTGTGAAG
GAAGACTATA GCGCAGCCAA GAAACAGCTG CAGCAAGTGT TGGCGACGGC GTCCAACGCG
ACGGACGCAT TGGCATTGTT GGGATTGCTG GAAGCACGGT CCGGCAAGCA AGTGGAGGAA
GGGTTGATGC ATTTGCGCAA AGCAACCGAA CTTGATCCCC TCAATACCGA TTTGGTAGTG
TTGGAAGCCA TGGCGTTACA AAAGTACGAA AATAACAACG TCAAATCCCT CGAGCGGTAC
AAGAAAGCGT TGCTGTTAAT GGAGCGAAAA ACCACGAAAG TGTCGTACGA GATCTACGCC
AATTGCGGTG TCCTATGCCA CGAACTGAAG AGGCACGACG AAGCGCTGGA CATGTACCGA
CGTGCGCTAG CTGTCTTGGA CGAGGATGGG TTTAAAGGAG CCGCCGTTTT TCAGCTAGCG
GATGGCCCTG AAAGAGGAAG AATTCGACAC GTGGACAACG CCATGTTTAA CGCATTTGTC
AATTCCAATC TCTTGGTGGA AGTGCTTGAT AGACACAGTA AAACCTTCGT CAAAGTACTG
GATGTACTCG AGGCGGACGT TGCGGGAATA TTGTCGAAAG GGGATCGAGT CTCCTTGGGA
GACGGATTTG AAACCAAGGT AGTGAGTTGG GAGAGCAGAG ACGGTGCTAT TGTGCTCGAG
CTGGCTGACG AATACGATCC AATGGATACT GACTCCAAGA AGGCGCCTCT CTTGGTTGTT
CGCGAGAACA ATCTTCTCTC GATACCAGAA GCAATCACTG TTGCTTTCAA TATAGCTCGG
CTCCACGAAG CCACTGGGCG GACTGTCGCA GCGATTGAGA TTCACAAAGC CATTCTGAAG
CGAAATCCGG CCTATGTCAA TAGCTATTTA CGTCTAGCAT GCATTGCTGT GGACTGTGGA
TCATTGAAAG AAGGTTCAGA ATGGCTCAAG ATTGCGGCTA GTACTGCACC TGGTAATCCT
GAAGTCTTGA CGCTGGTTGG AAATCTTCAT CTTTCACTTT GCGATTGGGC GCCAGCACAG
TCCGTTTTTG ATGGCCTTCT TTCCAAGAAG ATCCCCAATG TTGATGCATA CGCTTCACTC
AGTTTGGGTA ACATTTATTT CGCAAACCTG CACGTGAACG AGGACAAACG GTACGATAAG
CATTTACAGT ATGCAGCCGA CTATTATCGC CGCATCCTCG CCAAGGATCC AGCCAACGCC
TATGCGGCCA ACGGGATTGG CACTGTGCTA GCGGAAAAAG CTGAAATTTT TAAGGCCAAG
GAAGTCTTCA ATCGCGTCCG TGAAGTCAGT GGAGACAGTA TTCCTGATGC CCTGTTGAAT
CTCGGCCACA TTTTTTTGGC TCAGAAGAAA CATCCGGAAG CTCTCCAAAT GTACACGAAC
TATATGAAGC GGACGGAAGA CGGGACGACG CCTACTACGG CCAAGAGCAG GGTGGATGAC
GTGGTCAGCG TGTTGCTGTA TATAGCTTTT GCCTTTTTTG ATTGGGCCCG GCATACCGAA
CTGGCCAATG ATTCGAGTGC AGCGCCAGCT GACGGGAGAT ATAGAGAAGC TATGCAGCAT
TTGAATCTGG CCATTGGCAA AGGCAGCAAG CAAGATCTCG TACTCAAATA CAATCTCTGC
ATGACCAAGC TGCAGGCAGC CAATTGTGTT TTACAAAAAC TGACACGTAA TATCCCCCGA
TCTGTCGAGG AAGTCGAGGA AGCCTTACGA GGACTGGAAG AAAGTTTTCA GATTGTGGAA
CAGATTGTCA AGGACAAGGC CGACGGAAAA AAGGTCAATA TTTCCTCAAC GACGTTGCAA
GATTTCGTGA AACACTGCAA GGCTAACATT TTAAGTGCAC AATCTCATTT AGAAGACGAA
CGAAAACGTG CCAAGGAGGC CGAAGTGGAG CGTGAAATTC GCCGGCTGGC CGCTGAAGAG
GCGACAATCA AAGAGAGACT CAGAATGGAC CAGGCTGCAA TGGATGCCCA CAAGCTCCAA
GAAGAAAAGG ATCAAAAGGC AGAGGCCAAA ATGAAACAGG TAGAAGAGCT GCAATCTAAT
TGGCGCGAAG AGAAGGAGAC TAAGCAATCA GAAAAGGAAA AGCGGGCTCG AGGCCGAAAG
GATGAAATGA CCGCGGACGA AGTCGGGCTT GTGGTGGAAG ACGACAATCA CCAAGCAACC
AATGGTCACG GTTTGTTCGA TGATTCCGAC GATGACAGCG AAATAGTCGA TTCTCTACCG
AACGAAACGA AGGGAATTGG AGGTCTAGAA AAGTCGACCT CTTCAACTAA GGATTTGTTT
GGAGATAGCG ATGACGACCA GAGTGGTAAT GACGAGGACA GGAAAGGGAC CGTCAAGCCA
GACGCTACCA AAGCTGCAAT CACGAGCATG GATTTGTTTG GAGATAGCGA TGAAGACGAC
ATCGAGGTTG CGTACGGAGC GACCAAGCCC ACAAGCGAGG AGAGCAAAAA AGAGCCGCCT
GCAACAAGCA ATGACTTGTT TGGAGACACT GATGAAGATA GCGATGCCGA ACCGTCCACA
AACAGTGCAA AGAGACCCAA CGAATCAGGG ATTGCGGAAT TGGATGATGA TGGACAACCC
AACAAGAAAG CAAGGTTGTA AAGGGCAAAG TGACGCAATA TTTTTATACA TAATTCGATA
CTTTAAAAGA TGTTAAAAGG T
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| Protein sequence | MSATPVSPTP VEPNDADDEP VMPSFHIPIR SSIQFPDNDS LHHARFIEIF PEEMRDTPVS
TLLHVLKDES AELSTWADAG WHYMVQKKNR ESLTILEEAC DTTAATTTTT PSNDVDKTER
VRILAATGIA HLSSNGAADA TSGNTAKRSN VLDEARQQAD QKFTQAGKID PFFPMTWIGR
GMLNLWQGKH DQATFFFQTT LKQCGPVLPA LLGTAAVSFA QGDYTAAQTA YGQALRKYPH
ASGAASRVGF GLASYALGQV DRAKAAFRRA TAIDPENVEA MVGTAILDMA SVDVSDKDYA
AKMEEAIRVM SMANLLNHEN AMVQNHLANH YFWKWTPVNG TVEVTKGSQL VQMPSQAVPL
EPGERIRIGT KFETTVQDVE DDSNNNTAST FTVTDSWSEG SATGLKVWKK DYDRVIALAK
GAYGSTNVQS MQAESLFFLA RVYHVRGETD HALKFYEKAC KLAPALTPAR FGLAQTLIVK
EDYSAAKKQL QQVLATASNA TDALALLGLL EARSGKQVEE GLMHLRKATE LDPLNTDLVV
LEAMALQKYE NNNVKSLERY KKALLLMERK TTKVSYEIYA NCGVLCHELK RHDEALDMYR
RALAVLDEDG FKGAAVFQLA DGPERGRIRH VDNAMFNAFV NSNLLVEVLD RHSKTFVKVL
DVLEADVAGI LSKGDRVSLG DGFETKVVSW ESRDGAIVLE LADEYDPMDT DSKKAPLLVV
RENNLLSIPE AITVAFNIAR LHEATGRTVA AIEIHKAILK RNPAYVNSYL RLACIAVDCG
SLKEGSEWLK IAASTAPGNP EVLTLVGNLH LSLCDWAPAQ SVFDGLLSKK IPNVDAYASL
SLGNIYFANL HVNEDKRYDK HLQYAADYYR RILAKDPANA YAANGIGTVL AEKAEIFKAK
EVFNRVREVS GDSIPDALLN LGHIFLAQKK HPEALQMYTN YMKRTEDGTT PTTAKSRVDD
VVSVLLYIAF AFFDWARHTE LANDSSAAPA DGRYREAMQH LNLAIGKGSK QDLVLKYNLC
MTKLQAANCV LQKLTRNIPR SVEEVEEALR GLEESFQIVE QIVKDKADGK KVNISSTTLQ
DFVKHCKANI LSAQSHLEDE RKRAKEAEVE REIRRLAAEE ATIKERLRMD QAAMDAHKLQ
EEKDQKAEAK MKQVEELQSN WREEKETKQS EKEKRARGRK DEMTADEVGL VVEDDNHQAT
NGHGLFDDSD DDSEIVDSLP NETKGIGGLE KSTSSTKDLF GDSDDDQSGN DEDRKGTVKP
DATKAAITSM DLFGDSDEDD IEVAYGATKP TSEESKKEPP ATSNDLFGDT DEDSDAEPST
NSAKRPNESG IAELDDDGQP NKKARL
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