Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14212 |
Symbol | |
ID | 7202662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 258629 |
End bp | 259555 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181873 |
Protein GI | 219123108 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0513448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GCATCCTCCG TCACGGGCCT AATGCAATCC TGGACTGGAA ACAAGACGTT GAGTGATGCG GATTTGGATC AGCCACTCAA GTCTATGGAA CAACTTTTGA CGAGTAAAAA TGTAGCCCGG GAGGTGGCAC ACGAACTTTG CTTAGGCATA CGTGGGAAAC TTGAAGGAAA AAAGCTGAAT TCTCTGTATC GTGTGCAAAC GGCGGTAAGG CAGGCTTTGG AATCGACTTT GACCAAAATG CTTAAAATGC ACGTGGACTT GCTGCGAAAC ACAATGTCCA AACGAGGTGA CAACTCTTTG TTCAAAATGA GCAAACGTGC TCCCTATGTC ATTGCGGTAG TCGGGATCAA TGGGGTGGGT AAGAGCACCT CGTTGGCCAA ATTGGCATAT TATTTCAAGC AGAACGGTTG CTCTCCATTA TTAGTGGCGG GTGACACATT TCGTTCCGGC GCTGTCGAAC AACTCAAAGT TCACGCTTCT TGCCTAGACA TTCCTATGTA TTCACAAGGA TATTCCAAGG ATCCATCAAT AGTTGCAAAG GCAGCCATTC AGCACGCTAC GGAAGAAAAT CATGATGTCG TACTGATCGA TACTGCGGGA CGCATGCAAA ATAATGTTCC ACTTATGAAA GCCTTGGGCA AGTTGGTCAC AGAAAATAAA CCAGATTTTG TAATTTTGGT TTGCGAGGCT CTGGTAGGCC ATGACGGCTT GTCGCAATTT ACGATGTTCA AACAGGCGCT TGGGATCCGA GGTATTGACG GTCTGATATT GACAAAGTTT GATACAGTTT CGGACAAGGT TGGCGCGGCA TTGACTTTAA CACACCAAAC CGGAGCTCCT ATCATCTTTT GCGGAACTGG TCAAAAGTAC CATCACCTGA AGAAGCTCAG CGTGACGTCT GTAATTCAAA GTCTTTTTGC GTCCTAA
|
Protein sequence | ASSVTGLMQS WTGNKTLSDA DLDQPLKSME QLLTSKNVAR EVAHELCLGI RGKLEGKKLN SLYRVQTAVR QALESTLTKM LKMHVDLLRN TMSKRGDNSL FKMSKRAPYV IAVVGINGVG KSTSLAKLAY YFKQNGCSPL LVAGDTFRSG AVEQLKVHAS CLDIPMYSQG YSKDPSIVAK AAIQHATEEN HDVVLIDTAG RMQNNVPLMK ALGKLVTENK PDFVILVCEA LVGHDGLSQF TMFKQALGIR GIDGLILTKF DTVSDKVGAA LTLTHQTGAP IIFCGTGQKY HHLKKLSVTS VIQSLFAS
|
| |