Gene PG1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1950 
Symbol 
ID2552188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand+ 
Start bp2039740 
End bp2040900 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content46% 
IMG OID637150542 
Producthypothetical protein 
Protein accessionNP_906032 
Protein GI34541553 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTT TTTTTGACAG GGAATTTACG TTCGACCGTA CTGCACGCCT GTTTTTCATC 
ATCCTGTTGG TTGGAGGCAT TATGGCCATA GTCATTGGCT TGAGAGGCAT CCTTATACCT 
TTTTGTCTCT CTTGGATTCT TGCCTATGTG CTGATGCCTC TGGTTCGTTT TGTCCAGTAT 
CGGCTCCATT TTCGCTTTCG CTTTCTGTCG GTGATCACGG TGCTGGTTTT CATATCGGCA 
TTGATCTTTT TTGCCATTCT CTCTTTGGTT CCTGCTGTAG AAGAAGAGGT AAGCAAAACA 
ATAACCCTGC TCCAGCAGTA CCGCATCGAT GAGAATTTGC TACAGATGCT GCCGGCTCCG 
ATCCGCAAGT TTCTGTCAGA GAGTGGCAGC ATGAACGATC TGTTCAAAGG TATCTCTTAC 
GAGAAATTGA TGGAGAATAG CAAGGAGATA TTCGGACAGC TCAATAAGCT CGTCTCCGGT 
ACGATCAGCT TGTTCAGCTA TACGACGATC TTCTTCATAG GTGTTTTATA CTTCATTTTC 
ATCCTGTTCG ATTTCGAAAA ACTGGGCAAA GGATTTGTCA ATCTTTTCCC GGTCGGACAC 
CGTATTCGCG TTAGGAGCAT ACTCAAAGAA GTGGACAAGA ATATGAACAG CTACTTCCGC 
GGACAGGCCC TGATCGCCCT TTGTGTGGGC ATCCTTCTTT CCATCGGTTA CAAGATTATC 
GACTTTCCTC TGGGAGTTAC GCTCGGTCTC TTTATCGGTA TGCTGAATCT GATTCCATAC 
TTACAGATAG TCGGTTTGAT CCCGATTGTT TTCTTGTCAG TGCTTAAGGC GGCACAGACG 
GGACAGAATT TCTTCGTTGT TCTTGCCCTC GGTATAGGTG TGATGATGAT TGTCCAAGTA 
ATTCAAGACA CGATTCTGAC CCCCAACATC ATGGGCAAAA GGATGGGCAT GTCTCCTGCA 
ATGATTTTGC TTTCGATTTC CATCTGGGGG AGCCTGCTCG GCTTTTTCGG ACTGTTCATT 
GCCCTGCCGC TCACCATGTC GCTTTATTCC GTGTACAAAC GCTATGTGAT TCAGGATCCC 
AAGTTCATCC GAGAGGAGAA TGAAGAGACT ATGCCCAAGA AGGGGCTGTT TAGAAAGCAT 
AGCCGAAAGG AGGAAAAATG A
 
Protein sequence
MQSFFDREFT FDRTARLFFI ILLVGGIMAI VIGLRGILIP FCLSWILAYV LMPLVRFVQY 
RLHFRFRFLS VITVLVFISA LIFFAILSLV PAVEEEVSKT ITLLQQYRID ENLLQMLPAP 
IRKFLSESGS MNDLFKGISY EKLMENSKEI FGQLNKLVSG TISLFSYTTI FFIGVLYFIF 
ILFDFEKLGK GFVNLFPVGH RIRVRSILKE VDKNMNSYFR GQALIALCVG ILLSIGYKII 
DFPLGVTLGL FIGMLNLIPY LQIVGLIPIV FLSVLKAAQT GQNFFVVLAL GIGVMMIVQV 
IQDTILTPNI MGKRMGMSPA MILLSISIWG SLLGFFGLFI ALPLTMSLYS VYKRYVIQDP 
KFIREENEET MPKKGLFRKH SRKEEK