| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1900 |
|---|
| Symbol | |
|---|
| ID | 2551670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1999889 |
|---|
| End bp | 2000836 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637150495 |
|---|
| Product | ribosome-associated GTPase |
|---|
| Protein accession | NP_905985 |
|---|
| Protein GI | 34541506 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.830511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGAG TCGTAATTAA GAATACGGGT AGTCAGTATC TGGTGCGTTG CACGGATGGT
ACGGAGCTAT ACTGCATGGC GAAAGGCAAT CTGCGTCTGA AAGGCATCCG CTCCACCAAT
CCCGTAACCG TAGGCGATCG CGTGGAGATT GTCCCCGCTT CTCAGGACGG ACAGCCGGCC
TACATCAAAC GAATCCATCC CCGACGCAAT TATATCATCA GGCGAGCCAG CAACCTCTCG
AAAGAGTCCC ATATACTGGG AGCCAATTTG GATGCTGCCG TGCTGGTCTG TACCATCAAC
GATCCGGTGA CTACCACCGT CTTTATCGAT CGTTTCCTCG CTACGGCAGA AGCCTATCGC
GTACCGGTTA TTCTTGTATT CAACAAAATA GACTGCTATA CGCAAGAAGA TCGCTTGCAA
TTGGACCGGC TGTCGGCTGT CTACACCGCC ATAGGTTACC CCTGCTGCCA CGTGTCGGCG
ATTACGGGCG AAGGCCTCCC GGATCTCAAA TCCCTACTCG ATGGCAAGCT GACACTCCTT
GCCGGCCATT CGGGGGTTGG CAAAAGCTCT TTGATCAATG CCCTGATTCC TCATGCCGAT
TTGCGCACAG GGGCTATATC CCAAGCCCAT CATACCGGCA TGCATACGAC CACATTTTCC
CAAATGATCG ACTTCCCCGA TCTCTCCCCC GGGTCAGCTC TTATCGATAC GCCCGGGATC
AAAGGCTTCG GTACGCTGGA AATGGGCGAG TATGAAGTCT CTCATTATTT CCCGGAGATA
TTCGCTGCAA GTAAAGGCTG TCGATTCGGC AACTGCACGC ATACGCACGA GCCGGGCTGT
GCCGTTCTGG AAGCTCTTCG GAGGGGGGAG ATAGCCGAGA GCCGCTATAT CAGCTACTTG
AGCATTCTCG AAGATGAAAA TGCCGAGCGG TATCGTCCCG AATACTGA
|
|---|
| Protein sequence | MDGVVIKNTG SQYLVRCTDG TELYCMAKGN LRLKGIRSTN PVTVGDRVEI VPASQDGQPA
YIKRIHPRRN YIIRRASNLS KESHILGANL DAAVLVCTIN DPVTTTVFID RFLATAEAYR
VPVILVFNKI DCYTQEDRLQ LDRLSAVYTA IGYPCCHVSA ITGEGLPDLK SLLDGKLTLL
AGHSGVGKSS LINALIPHAD LRTGAISQAH HTGMHTTTFS QMIDFPDLSP GSALIDTPGI
KGFGTLEMGE YEVSHYFPEI FAASKGCRFG NCTHTHEPGC AVLEALRRGE IAESRYISYL
SILEDENAER YRPEY
|
|---|
| |