Gene PG1213 details

Gene Information

• Locus tag: PG1213
• Symbol: rnhA
• ID: 2553213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1292573
• End bp: 1293223
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637149893
• Product: ribonuclease H
• Protein accession: NP_905404
• Protein GI: 34540925
• COG category: [R] General function prediction only
• COG ID: [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.799475
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAAGA AGTGGTATGT GGTCTGGACC GGGCATACAC CCGGAGTTTA TGATAATTGG 
GATGAATGTC GAGCGCAAAC AGAGGGATTC AATAAAGCCC GCTACAAAAG CTTTGCTACC 
GAAAGCGATG CCCTAAGAGC CTATGAAGAC GGAGCAGATG AATTCTACCG CAGAGCATAC 
GGATCCACTG GTACGCACGG AGCAGACAAG CATCCGGATA TGGAGACTTT ACCCCGAACA 
AGTCCTATCT GGGAGAGCCT TTCAGTGGAT GCAGCCTGTA GTGGCAATCC CGGCCCGATG 
GAGTATCGGG GTGTACTGAC AGCATCCAAG GCCGAAGTCT TTCGCGTAGG CCCTCTGGAA 
GGAGGTACGA ACAATATCGG AGAGTTTCTG GCCATTGTTC ATGCCTTGGC TCTTCTGGAG 
AAAATGAAGA GACCTCACTA CCCTATCTAT TCGGATAGCA TGACGGCTAT CAGCTGGGTT 
CGAAAGAAAA AATGCAAAAC CCTTCTCGCT CGTACAGATA AAAACGCAGC GATCTTCGAC 
CTCATAGAGC GTGCAGAGCA TTGGCTCTCT ACTCATCGGA TTACCAACCC TATATATAAA 
TGGAATACTG TCGACTGGAT GGAGATACCG GCCGACTTCG GACGGAAATA A 

 

Protein sequence

MAKKWYVVWT GHTPGVYDNW DECRAQTEGF NKARYKSFAT ESDALRAYED GADEFYRRAY 
GSTGTHGADK HPDMETLPRT SPIWESLSVD AACSGNPGPM EYRGVLTASK AEVFRVGPLE 
GGTNNIGEFL AIVHALALLE KMKRPHYPIY SDSMTAISWV RKKKCKTLLA RTDKNAAIFD 
LIERAEHWLS THRITNPIYK WNTVDWMEIP ADFGRK