Gene PCC7424_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1078 
Symbol 
ID7112063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1181358 
End bp1182368 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content36% 
IMG OID643479347 
Productprotein of unknown function UPF0118 
Protein accessionYP_002376399 
Protein GI218438070 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.359333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCTGA GTAAGTTAAT CGGCCTTGTT GCTCTGATCC TATCCATTTA TATTTTATGG 
AAAATTAGAC AAGTGGTTTT ACTTGCCTTC ACTGCCGTCG TTTTAGCAAC AGTGATCAAT
CGGATTGTGG TTTTTTTAAT GCCTAAACTG AAAGTCAAAC GGGGGTTTTC TATCATTATA
ACCTTTGTTC TTTTGTTAGT CGTTCTGGGC TTATTTAGTC TGATTGTTTT TCCTCCCTTT
ATTGAACAGT TTCGGGAATT AATTAATCAA GTTCCTCAAG GGATTGAGCA ATTAGACCAA
TTTAGACAAA TTTTACCTGA ACCTTTTCAA CAAACTTTGA GTGATACTAT TAATCAATTA
GTTCGTCCTA TTCGCTTAAT TGAAAGTCGC TTATTTGGGA ACTTTTTTGC TCTTTTTTCT
AGTACATTTA CGATTATTGT CAGCACTTTG CTTGTCCTAG TTCTTATCAT TATGCTCCTT
TCTAATCCGA AACAGTATAG ACAAGCGTTT ATCCTTTTAT TTCCGGCTTC TTTTCGTCCT
AGAGCAGATG AAGTATTGAC CCAATGTGAG GACTCTTTAG CGGGTTGGTT TATTGGCATT
ATATTTAATA TGACAGTGAT CACGATTTTG AGTGGGTTTG GGTTATGGAT TTTAGGCGTT
CCTTTACCTC TAGCTAATGC TTTATTAGCA GGATTACTAA CATTTATTCC TAATGTAGGC
CCTACGTTAA GTGTGATTCC TCCTATGGCG ATCGCTTTAC TGGATGCCCC TTGGAAAGCT
TTAGCTGTGC TAGGTCTTTA TATTCTAATT CAACAGATTG AAAGTAATAT ATTAACTCCT
ATTGTGATGC AAAAACAAGT CTCTCTTTTA CCGGCTGTTA CCTTAATCGC TCAAGTTGCT
TTTGCTACTT TCTTCGGGTT TTTAGGGTTA TTTTTAGCAT TACCTCTAAC GATTATTGCT
CAAGTCTTAC TCAAAGAATT ATTAATTAGA GATGTATTAA ACCACGCTTA A
 
Protein sequence
MKLSKLIGLV ALILSIYILW KIRQVVLLAF TAVVLATVIN RIVVFLMPKL KVKRGFSIII 
TFVLLLVVLG LFSLIVFPPF IEQFRELINQ VPQGIEQLDQ FRQILPEPFQ QTLSDTINQL
VRPIRLIESR LFGNFFALFS STFTIIVSTL LVLVLIIMLL SNPKQYRQAF ILLFPASFRP
RADEVLTQCE DSLAGWFIGI IFNMTVITIL SGFGLWILGV PLPLANALLA GLLTFIPNVG
PTLSVIPPMA IALLDAPWKA LAVLGLYILI QQIESNILTP IVMQKQVSLL PAVTLIAQVA
FATFFGFLGL FLALPLTIIA QVLLKELLIR DVLNHA