Gene PC1_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4188 
Symbol 
ID8135186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4726080 
End bp4726784 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content55% 
IMG OID644867505 
Producthypothetical protein 
Protein accessionYP_003019738 
Protein GI253690548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCTG AATATCAGCG CTGGCTGATG GCGCTTTCCG CCCCAATGGT CGCCCTCAAT 
ATCAAGTACG GCGCCCGCTT CTTCGACCCG ACCTTTTATG AGCCCGGTGA AACCATCAGT 
CTGAGCAACA GCTGGGGTAT CACTTCCCGC GAGGGGCTGA TCTCAATGAT TAACGATATG 
ACAGACGGCG GCCATGCCGA GCGTCTGGCG TATTACTACC ACCTTTGGCA CCACCTGACG 
GCATCCGAAT GGCAGCAGCA TTGCGCCAAT CAATCTGAAG AAGCACAAGG TGCGCTCATG 
CTGGTGACCG AAACGGCCGC GCTATGCGGC GAAGGTGGAA TACGCGCCTG GGATCTGGGG 
CGCATGAGTT TCCTGAGCCG CGTCGGGTTA CTCAACGGCT GGATTAGTGA AAAAGAGAAC 
CTGTGGATTC ACACCCGTCT GGCCGACAGG GCGCGTTACT ATTACCGCAG TTGGGAAAAT 
TATTACGCCG CATTCTTGAT CGGCCGCACC TACTGGCTTT CCTCGGATGA GGAAGACCCG 
GAATGCCAGC GCTACATTTT CAGCAACGCT AGCCAGAATC CTGACTACAT TGACCAGATC 
GGCACGCTCT ATACCCACCC AGACTGCCCG ATTCATGACC TCGACTGGGA TGTTGATCCG 
ATAGAAATGG ATAAGCCCGA GTCCTTACCA GAAGCGGAAA TATAA
 
Protein sequence
MEPEYQRWLM ALSAPMVALN IKYGARFFDP TFYEPGETIS LSNSWGITSR EGLISMINDM 
TDGGHAERLA YYYHLWHHLT ASEWQQHCAN QSEEAQGALM LVTETAALCG EGGIRAWDLG 
RMSFLSRVGL LNGWISEKEN LWIHTRLADR ARYYYRSWEN YYAAFLIGRT YWLSSDEEDP 
ECQRYIFSNA SQNPDYIDQI GTLYTHPDCP IHDLDWDVDP IEMDKPESLP EAEI