Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3694 |
Symbol | |
ID | 8134674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4169109 |
End bp | 4170410 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866994 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003019245 |
Protein GI | 253690055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAG CCACGGTTTC TTCTAGCCAG CGCACAGCGG CAAATATTCC TCGATTACGC TGGTTGCGGA TCGTACCGCC CATTTTGATT ACCTGCATTA TTTCCTATAT GGATCGCGTC AATATTGCCT TCGCGATGCC GGGCGGTATG GATGACGAAT TGGGTATTAC GGCATCGATG GCCGGACTCG CAGGCGGGAT CTTCTTTATC GGCTATCTGT TTTTACAAGT GCCGGGCGGC AAACTCGCCG TACACGGCAA CGGTAAAAAG TTTATCGGCT GGTCACTGCT GGCCTGGGCC GTCATTTCGG TGTTAACCGG TCTGGTGACC AATCAGTATC AGTTGCTGTT TTTGCGCTTT GCGCTGGGGG TATCCGAAGG CGGTATGCTC CCGGTGGTAC TCACGATGAT CAGCAACTGG TTCCCCGATA AAGAGCGTGG CCGCGCCAAC GCGATTGTCA TCATGTTTGT ACCCATCGCC GGCATTTTGA CCGCCCCGCT TTCTGGCTGG GTCATCACAA CTTGGGATTG GCGCATGCTG TTTCTGGTGG AGGGAGGGGT TTCGCTGGTT GTTATGCTGC TGTGGTGGTT TACCATTAGC AACCGCCCGC AGGAAGCAAA ATGGATTTCA CAGGCAGAAA AAGAGTATCT GATCAACACG TTGCAGGAAG AACAAGCGGC CCTGCAAGGC AAAACTGTCC GCAATGCTTC CCTCAGTCGG GTATTGCGCG AAAAGTTGAT GTGGCAGTTA ATTTTGGTGA ATTTCTTTTA CCAGACAGGT ATTTACGGCT ACACCCTGTG GTTACCCACC ATCCTGAAAG GGCTGACCAA TGGCAATATG GAACAGGTCG GCATTCTGGC TATTTTGCCT TATATCGGGG CAATCCTCGG TATGTTCACT ATCTCCTACC TGTCCGACAA CTCAGGAAAA CGTAAGGTCT TCGTCGCGTT ACCACTCGCC TGTTTCGCTA TTTGCATGGC ACTGTCCGTT TTGCTCAAAA GCCATATCTG GTGGTCCTAT GCCGCGCTAG TCGGCTGCGG TGTCTTCATT CAGGCCGCCG CAGGGGTGTT CTGGACTATT CCTCCCAAGT TGTTTGATGC CGAAGTCGCT GGCGGCGCTC GCGGTGTCAT TAATGCGCTT GGCAACCTCG GTGGCTTCTG CGGCCCTTAT ATGGTCGGCG TCCTGATTTC AACCTTTAAC AAAGACGTTG GCGTCTACAG TCTGGCTATC TCACTGGCGA TTGCCGCCGT ACTGGCCATG ATGCTGCCAC CGCGCTGCGA TGAGTCTACG GAGGCAGCAT GA
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Protein sequence | MNTATVSSSQ RTAANIPRLR WLRIVPPILI TCIISYMDRV NIAFAMPGGM DDELGITASM AGLAGGIFFI GYLFLQVPGG KLAVHGNGKK FIGWSLLAWA VISVLTGLVT NQYQLLFLRF ALGVSEGGML PVVLTMISNW FPDKERGRAN AIVIMFVPIA GILTAPLSGW VITTWDWRML FLVEGGVSLV VMLLWWFTIS NRPQEAKWIS QAEKEYLINT LQEEQAALQG KTVRNASLSR VLREKLMWQL ILVNFFYQTG IYGYTLWLPT ILKGLTNGNM EQVGILAILP YIGAILGMFT ISYLSDNSGK RKVFVALPLA CFAICMALSV LLKSHIWWSY AALVGCGVFI QAAAGVFWTI PPKLFDAEVA GGARGVINAL GNLGGFCGPY MVGVLISTFN KDVGVYSLAI SLAIAAVLAM MLPPRCDEST EAA
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