| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2862 |
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| Symbol | |
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| ID | 8133816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3235912 |
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| End bp | 3237891 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644866150 |
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| Product | Fibronectin type III domain protein |
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| Protein accession | YP_003018427 |
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| Protein GI | 253689237 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.331707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT TTTTACCTCG TACTCGCCTT ACGCTCTGCG CGACACTCGT TCTGAGCGGC
CTGATTGCCG GATGCAGCGA TAGCGACTCA ACGCCGAATG TGGATGTTGA CCGTTCTGCC
GCGCCACAGA ATCTTAAAGT GCCGACATTG GCCTATGATG ACAACAGTGT GGTACTGGCC
TGGGAAAAAC CGACTAAACC TGCCGCGGGT ATTAAGGATT ACCGTGTCTA CATGAATGGA
ACCTTGCTGG GCGGTACGAT TGACAACCTG AACACTCACT CGCCCGCCAA GCCTTATATC
GATAACTTCT ACAACGCGAT CGATACCGAT AACTGGCATG TTCGCGTTAG CTTCCATAAT
TTCAAGGTGA CAAATCTGTC GCCAGAAACG GAATATCGCT TCACGGTGCG CGCGCTTTAT
GACGACGGCA AAGAATCGGT AGATAGTGAA ACCATCGTGC AGAAAACGAC GGCGACGCCA
GCCTCATTGA ATGTAACCAA CTATGGTGCA AAAGGGGATG GCATAGCCAA TGACACGCTG
GCTATTCAGA AGGCAATTGA CGATTGTACG CCAACGGCGT ATCCGAAAGG TTGTAAAGTC
GTGGTTGAAG GGGGAACGTT TAAAACTGGC GCGCTGTTCC TGCATAGCGA CATGACGTTT
GAGGTTGCAA AAGGCGCTAC GCTGCTGGGG TCGGCAAATG GTGACGACTA TCCACTTGCC
CGCGGTTACT ATCTCTACCC TTACACTTCC CCTCAATTAC CTAAGCGTCC GCCTTCGCTG
ATCAACGTGT TGGAAGCGGA CGATCGGGGC AATAGCCATG CCGGTACCTT TAAAAATATT
CGTATCGTCG GGCAGGGCAC GATTGATGGC AACGGTTGGA CGCGCGGCAT TAAAGCCAGT
GATACAAACA TTACTGAAAT TGATGAATTA AAGAACGCAT TGCCACTCTA CCGTGCGAGC
AAAGCGACCA ATGTTGGCAG TGACGGTATT CTGGCAAAAG ACCAAACGGC CAAAGCCGTT
ACTGAAGGCA TGTCACTGGA GGAAGCGTAC AAAAACCGAC GCTCCAGCCT GATGACGCTG
CGCGGTGTGA GCAACATGTA TCTGGAAGGG CTGACGATTC TGAACCCGGC TTACCACGGT
GTGATGGTGC TGGAATCCGA AAATGTGGCG ATGAATGCGC TGGTGCACAC GACGTATGAT
GCGAATAATG CGGATGGCAT TGAATTCGGC AACAGCCAAA ACGTCATGGT ATTCAATAAC
TTTTTTGATA CAGGTGATGA CAGCGTAAAC TTTGCGGCAG GGTACGGCGC CGAGGTGGCG
ACGCTGGGGC AAAAAGCGCA GAGCGGGGCC TGGATCTTCA ATAACTACTT CCGCCGCGGA
CACGGCGCGG TGGTCACGGG TAGCCATACC GGTGCCTGGA TTGAAAAAAT TGTTGCTGAA
GATAACGTCA TGAATAAGAC AGATGTTGGC TTGCGCATGA AGAGTCGACC CTATTATGGT
GGCGGCTCGC GTGACGTGGT ATTCCGTAAT AACGCGATGC GTGATATTGT CAACGAGCCG
TTCGTTTTCA CTATCAAATA TAAAGCGGAC GTGAACGATA CCCAGCCTGC GGCTGAACCT
GCACAATTCC GTGATGTGAC CGTCTCCAAC GTCACGATTG ATGGCTCAGC GAAGAAAAAC
AGTATTCTGG TCGATGGGAT GACCGTCGCT GAGATGGCTG ATGCGTATAA GTTCTCTTTT
GAACGTGATG CCTATCATCA AGGCTTGCAT TTTGAGAATG TAAAATTCAG AAGTGTAAAA
GCCACGGACA TTACGTTCCT GAAGAACAGT GACTTTAAAA ATGTCATTTT TGAGAATGTA
CCGGGAGCCT GGAATTTCGG TCATATTGAA AATATCAGGC TCGAAGACCG TGTAAATAAT
GATGCCGCGC TGACGACCAG CGGTGATGAA ACCATCACCC GGGAAGCCGC AACGGAATAA
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| Protein sequence | MTDFLPRTRL TLCATLVLSG LIAGCSDSDS TPNVDVDRSA APQNLKVPTL AYDDNSVVLA
WEKPTKPAAG IKDYRVYMNG TLLGGTIDNL NTHSPAKPYI DNFYNAIDTD NWHVRVSFHN
FKVTNLSPET EYRFTVRALY DDGKESVDSE TIVQKTTATP ASLNVTNYGA KGDGIANDTL
AIQKAIDDCT PTAYPKGCKV VVEGGTFKTG ALFLHSDMTF EVAKGATLLG SANGDDYPLA
RGYYLYPYTS PQLPKRPPSL INVLEADDRG NSHAGTFKNI RIVGQGTIDG NGWTRGIKAS
DTNITEIDEL KNALPLYRAS KATNVGSDGI LAKDQTAKAV TEGMSLEEAY KNRRSSLMTL
RGVSNMYLEG LTILNPAYHG VMVLESENVA MNALVHTTYD ANNADGIEFG NSQNVMVFNN
FFDTGDDSVN FAAGYGAEVA TLGQKAQSGA WIFNNYFRRG HGAVVTGSHT GAWIEKIVAE
DNVMNKTDVG LRMKSRPYYG GGSRDVVFRN NAMRDIVNEP FVFTIKYKAD VNDTQPAAEP
AQFRDVTVSN VTIDGSAKKN SILVDGMTVA EMADAYKFSF ERDAYHQGLH FENVKFRSVK
ATDITFLKNS DFKNVIFENV PGAWNFGHIE NIRLEDRVNN DAALTTSGDE TITREAATE
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