| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2732 |
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| Symbol | |
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| ID | 8133685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3098132 |
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| End bp | 3099046 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866020 |
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| Product | nitrate ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018298 |
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| Protein GI | 253689108 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0882865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACC AGGCCCAAAT CATTCCGATT ACCGCGGATA ACGCTCCGGA AACCGTGCAC
AGCGCTGAAA TTATGCCGCT GCCAACCAAA CCGGCAGCAC CTGAAAAAGC ACCGGCAACG
CCTGCTTTCG CCTACCGCCC GCTGCTGCGT AAGCTGTTTC AGCCGCTTTT CCCAGCGGTG
CTGGGGTTGG GTCTGCTGGT GGCGGTCTGG CAGATTGCCG CGCTCAACAG CGAAAACTTC
CCGACGCCGT GGGCGACCTG GCTTGCGGCG CTCAGCCTCT TCGCCGATCC GTTTTATATC
GCAGGACCGA ACGATCAGGG TATCGGCTGG AACGTATTGG CCTCGCTGCA ACGCGTGGGT
ATTGGCTTCG GGCTGGCGGC GCTGGTCGGT ATTCCTACGG GGTTCCTGAT TGGCCGTTTT
ACGTTTCTGG CCAATATGCT CAACCCGATT ATTTCTCTGC TGCGCCCGGT CAGCCCGCTG
GCGTGGCTGC CTATCGGGCT GCTGCTGTTC CAGCGCGCTG AACCGGCATC CAGCTGGACT
ATTTTCATCT GCTCCATCTG GCCGATGATC CTCAACACCG CCGAAGGCGT ACGTCGCATC
CCGCAGGATT ACCTGAACGT GGCGCGCGTA CTAAAGCTCT CCGAATTCAC CATCATGCGC
AAAATTCTGC TGCCTGCGGT GCTGCCTAAT GTCTTAACCG GCGTACGTCT GTCGATTGGC
GTTGCCTGGC TGGTCATTGT CGCGGCGGAG ATGCTGACCG GCGGCGTCGG GATCGGCTTC
TGGATTTGGA ATGAGTGGAA CAACCTGAAT GTGGAAAACA TCATCATCGC CATCGTGGTG
ATTGGTGTAA TCGGTCTGCT GCTTGAGCAG GGACTGGTGT GGATTGCTAA CCGTTTCAGC
TATGACAACC GCTAA
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| Protein sequence | MKNQAQIIPI TADNAPETVH SAEIMPLPTK PAAPEKAPAT PAFAYRPLLR KLFQPLFPAV
LGLGLLVAVW QIAALNSENF PTPWATWLAA LSLFADPFYI AGPNDQGIGW NVLASLQRVG
IGFGLAALVG IPTGFLIGRF TFLANMLNPI ISLLRPVSPL AWLPIGLLLF QRAEPASSWT
IFICSIWPMI LNTAEGVRRI PQDYLNVARV LKLSEFTIMR KILLPAVLPN VLTGVRLSIG
VAWLVIVAAE MLTGGVGIGF WIWNEWNNLN VENIIIAIVV IGVIGLLLEQ GLVWIANRFS
YDNR
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