| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2660 |
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| Symbol | |
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| ID | 8133608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3015638 |
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| End bp | 3018736 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865943 |
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| Product | phage tail tape measure protein, TP901 family |
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| Protein accession | YP_003018226 |
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| Protein GI | 253689036 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATC GCAATCTCAA TATTCGCGTG GCGTTCAGCG CGATCAATAA TATGGCTCGG
CCCGTCAGTG CTGCACGCAG CGGCACTGCG GCGCTGGCTG ACCAAATCAG AGCAACACAA
AACACCCTCA ACGGGTTAGG ACGTCAGGCC AGCAGCTTCG ACCGTCTGAG CGCTGCATCC
GCTAAAACAA CCCGTGAACT GGAACAAGCT AAAGCCAAAG CCGCCGCGAT GCGTGCCGAA
TTTGGTGCCG CCAGTGCGCG AACGGACGAA CAAAACGCGG CCCTGAAACG GCAGCGTGAG
CTAATCAGGC AATTATCAAC GGCTCAGACC AACGAAACCG AACAGTTAAA ACAACTGCGG
GCAGAGCTGG CGCGGCACGG CGTGATACTC GATTGCAGCC GCAGGGCAAC AGACCAGATT
AGCGATCAAA CCGCACGCTA TAACCGCATG TTAGCGGAAC AGAAACGGCG GTTAGCGGCA
GTGACGCAGG CTCAAGCACG CTACGATAGG ATGCAGCAGA CGGCGAGTAA CCTGCGTAGC
ACAGGGGCAA TGGCAATAGG TGCAAGTGCA GCCGGTGCGT ATGTCGGTGC CAGAATGATG
GCCCCTAATC TGCAATCAGA CAAAAGCGGC GCAGTGATTG CCGCGCAAAA CGCTGAAGCT
CCTGCAATGG GTACGCAGTA TTCGAAAATC ATTAAAGGGA TTAATAGCGC CGGTGTGAGC
AATGACCTCG CTCAGATCGC CAGCACTGTA TCTGCGGTGC GTAGCTCGCT AGGCGCATTA
GGTGAGGTCG GTGAAGCTGA GTTAGACCGG ATCTCGCGCA AAGCGTTAGA TATGCAATCC
GTGCTTGGCG GCGATACGGC GGAACATATC CAGATTGCCG CCATTATGAT GAAAAATGGC
CTGGCTCGCA GCAGCGATGA AGCATTCGAT CTGATGGCGG CAGGAATGCA ACGCGTGTCT
ACTCAGATGC GCGGCGAGTT ACCTGAGATA TTGCATGAGT ACTCAACGCA TTTCAGGAAC
ATGGGTTACA GCGGTTCTGA AGCTATGACA CTGCTTGTCA GCATGGCACA GCAAGGAAAG
TTTGCGCTGG ATAAGACTGG CGACGCCATC AAAGAATTTT CAATTCGCGG CTCTGACATG
TCCAAAGCCA GTGTAGAGGC GTATGACGCA ATCGGACTGA ATGCACAGCG CGCGTCATCT
GCTATCGCAA GCGGCGGTGC ACAGGCGCGT AACGCGATGC AGCAAACTGC ACAGGGGCTA
TTGAAGATTA AAGACCCAGC CGCGCGGGCG AATGCAGCCA TTGCATTATT CGGCACCCCG
ATAGAAGACC TTTCTATCGA TCAGATCCCT AACTTCCTGT CAGCGCTAGC CAATACCACA
GACCAATTCA GCAATGTTAG CGGAACGGCC GAACGTATGG GCAGCACGTT ACGCGATAAC
CTGTCGGGGG ATATCGACAA GCTGGGTGGC GCACTGAGTG GGTTACGTTT TGCCATCTTT
GAAAATGATT CAGGTGTTCT GCGTTCGCTG GCTCAGGGCG CCACGGCGTT AGTAAATAGT
GTCCGTGAAT GGGTAACGGC TAACCCTGAG TTGGCTCAAA CACTGCTTGT GGTTGTGGGC
GGTGCGTTGG CGCTCACCGC AGCCATCGGC ACCGTCTCCC TTGCGACTGG CATATTGATG
GGCCCATTCG CCAAACTTCA GCTTGGTTTT TCTCTGTTAA CGGGTGGCAG AGGGATTGGA
CCGGCGACCG GAATGTTCAG TCGATTCCGC AATATGATTA CGGGGAGCCT GTCCAGCACT
CGCGCGTGGG GTGGCATCCT TACCAGTATA CGCAGTGGCA TCGGTGGTAT TGGCAATATC
GCTCAAGGTG CAGGCCGTGC GTTGTTGATG GTATTCACTC AGCCAGGCGC AGCGCTATCG
GCGTTAGGTA ATGGCGTGCG AATGCTGGCG ACATCGGGAT TTTCTGCACT GAGCGGTTCG
GGGATGGCGG TATTTAATAT CCTGCGTACC GGCTTCATGC TGTTGCTCAG TCCTATCGGC
ATTATCGGTG CGGCAATCGT TGCGGCCGGT GTATTGATTT ACAAATACTG GGAACCGATC
AAGGCGTTTT TCAGTGGCTA TTTTAGCGGT CTGGTTGCTG GCCTGGAACC GGTTAAACAA
TCGTTCTCTG CGTTATCACC CATTTTCGAC GGGATCGGTC GTGCCATTAG TGGCGTATGG
GACTGGTTCA AAAAACTGTT TGAACCAGTC AACACCTCAT CCGAATCGCT GAAACAATGC
ACCGAAGCGG GGAAAGTATT TGGTGAAGTG GTTGGCATGG CGATTGGTGG CGTAGTGACG
GTTATTTTGA AAGTTGCTGA AGGCATTGGC TGGATACTGG AAAAATTAGG GGTGATCCCT
GAAGCCGCAA ATGCCGCCGT CTCAGCATCA AATGCCATGA ATGGGGCGAT CCCACAAAAA
GGCCATGAAT CTAAAAAGCC GGTCATGTAC GTGTGGGATG AGAAACAAAA GAAAATGGTG
GCGCAGGAAT GGAAACCACA GCCCCCCAAA GAAGCCGATG CAGTTATTAA AACTGGTGAG
GCAGCAAAAC CACCGGCAGG TGAAAGCAAC AAGCCTAAAA CTGGAGCGTT GCAGGATCTG
ACTGGCAGCA ATCCCAAAAC AGAAAAATCA GGCAGCACGG CAACCACTGA AGAGAAAAAA
GATCCCAATA AGCTGGGCGA TATTGTTTTT AAAAACGTGC CGCCTGCCGT CATGCTGGCG
AACGGCTACC GTGAATCACA GGTTATGCCT GCACAGCCCA AAGTCCCCTT ACTGGAACGG
GTGAAGCAAA CCGCCGGTGT GTTGGCCGCG TCTGTCCTAC CGTTCACGGT GCAACCTGCT
GGGGCGGACG TTCCGGCCAT CAATTCACCT GCAGCACAGA TGAAAACGGC GATGTCTGCC
GGTATGGCCA GCACAGACAA ATATGAAATC AATATCACGA TTCAGGATGC ACGCAGCCTG
GATGAAGACA AACTCGTCGC CAGACTGCGG CGGGAAATAG ACGATATTGA ACGTCGTAAG
CAGCGTCGCC AGCGCTCACA ACTAACCGAT CACGTATAG
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| Protein sequence | MTDRNLNIRV AFSAINNMAR PVSAARSGTA ALADQIRATQ NTLNGLGRQA SSFDRLSAAS
AKTTRELEQA KAKAAAMRAE FGAASARTDE QNAALKRQRE LIRQLSTAQT NETEQLKQLR
AELARHGVIL DCSRRATDQI SDQTARYNRM LAEQKRRLAA VTQAQARYDR MQQTASNLRS
TGAMAIGASA AGAYVGARMM APNLQSDKSG AVIAAQNAEA PAMGTQYSKI IKGINSAGVS
NDLAQIASTV SAVRSSLGAL GEVGEAELDR ISRKALDMQS VLGGDTAEHI QIAAIMMKNG
LARSSDEAFD LMAAGMQRVS TQMRGELPEI LHEYSTHFRN MGYSGSEAMT LLVSMAQQGK
FALDKTGDAI KEFSIRGSDM SKASVEAYDA IGLNAQRASS AIASGGAQAR NAMQQTAQGL
LKIKDPAARA NAAIALFGTP IEDLSIDQIP NFLSALANTT DQFSNVSGTA ERMGSTLRDN
LSGDIDKLGG ALSGLRFAIF ENDSGVLRSL AQGATALVNS VREWVTANPE LAQTLLVVVG
GALALTAAIG TVSLATGILM GPFAKLQLGF SLLTGGRGIG PATGMFSRFR NMITGSLSST
RAWGGILTSI RSGIGGIGNI AQGAGRALLM VFTQPGAALS ALGNGVRMLA TSGFSALSGS
GMAVFNILRT GFMLLLSPIG IIGAAIVAAG VLIYKYWEPI KAFFSGYFSG LVAGLEPVKQ
SFSALSPIFD GIGRAISGVW DWFKKLFEPV NTSSESLKQC TEAGKVFGEV VGMAIGGVVT
VILKVAEGIG WILEKLGVIP EAANAAVSAS NAMNGAIPQK GHESKKPVMY VWDEKQKKMV
AQEWKPQPPK EADAVIKTGE AAKPPAGESN KPKTGALQDL TGSNPKTEKS GSTATTEEKK
DPNKLGDIVF KNVPPAVMLA NGYRESQVMP AQPKVPLLER VKQTAGVLAA SVLPFTVQPA
GADVPAINSP AAQMKTAMSA GMASTDKYEI NITIQDARSL DEDKLVARLR REIDDIERRK
QRRQRSQLTD HV
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