3 homologs were found in PanDaTox collection
for query gene PC1_2210 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_2210  type III secretion protein  100 
 
 
181 aa  374  1e-103  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1887  hypothetical protein  39.24 
 
 
176 aa  94  1e-18  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1211  type III secretion protein HrpP  40.32 
 
 
190 aa  41.2  0.009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.111608  normal  0.541783 
 
 
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