Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2173 |
Symbol | |
ID | 8133117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2486574 |
End bp | 2487500 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644865461 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003017748 |
Protein GI | 253688558 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAAAA TCGATTATAG ATTAATCAAG CAATTGTATT TATTCCTTGC TGTTGCTGAA GAAGAGCATT TTGGTCGGGC GGCAGCGCGA CTTGGGATGT CTCAGCCTCC GCTGACTGAA CAGATAAAAA TACTCGAGCA ATCTTTGAAG TTAACATTAT TCGAACGTTC ACGGCGTGGG ACGACCCTTA GCCCAGCCGG AAAAGCTATT TTGCCGCAGG TCAAAAGATT TGTTGACCAC ATGGCGTCGT TAGAAAAAAT GGTTAAAGAA GTCGCTCAGG GAAAGGTCGG TGTGATCCAT ATAGGTGCAA TTACATCGGC GATGTTTGAT GTTGTCCCTG AATTTCTAAA CTATTTTAAA CATCACTATC CCGACGTGAC TGTTTTTGTT AATGAGATCG ACAGTGCTGA AGCTATTTCA TCATTATTAT CTGGCAAATT GGATATGGCT TTTGTCAGGG TTGAGGGGGA TATTGGACAG ACACTGAAAT CTATACCGCT GACAGAAGAT TTATTGGGAG TCGCATTGCC TGTAGAACAT CCTATGTCTT GTAATAATGA AATTCGGCTT GGCGATCTGA AAGATGAAGC ATTCGTTATG TCATCACGAC GTGTGAACCC GACATATTTT GATATATTGA CCTCGGCTTG CAGAGAAAAT GGTTTTAATC CACGAATCCT GTATGAAGTT CGTTCAGTGA CGGCGCAAAT TGCTTATGTG AGTTGCGGAC AGGGCGCTGC TCTTGTCCCT TTGAGCATGA GTCGCTTTAT TCCTGGTAAT GTCCGTTTAA TTCCTCTCAA AGAATCAATA AAGATAGTAA CAGCTGCTTT AGTTTGGAAT CCTGGTAACG GTCATCCTCT TGTTGAATAT GGGGTTAAGT GGCTAACGCA ATACGTGGCT AATAAGAAAT CCGTATTAAC CTATTAG
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Protein sequence | MSKIDYRLIK QLYLFLAVAE EEHFGRAAAR LGMSQPPLTE QIKILEQSLK LTLFERSRRG TTLSPAGKAI LPQVKRFVDH MASLEKMVKE VAQGKVGVIH IGAITSAMFD VVPEFLNYFK HHYPDVTVFV NEIDSAEAIS SLLSGKLDMA FVRVEGDIGQ TLKSIPLTED LLGVALPVEH PMSCNNEIRL GDLKDEAFVM SSRRVNPTYF DILTSACREN GFNPRILYEV RSVTAQIAYV SCGQGAALVP LSMSRFIPGN VRLIPLKESI KIVTAALVWN PGNGHPLVEY GVKWLTQYVA NKKSVLTY
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