Gene PC1_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2109 
Symbol 
ID8133053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2414290 
End bp2415243 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content49% 
IMG OID644865398 
Producthypothetical protein 
Protein accessionYP_003017685 
Protein GI253688495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.129908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGA AGACTACTGT TATTGCATCT ACATTGTTGT TATCACTCTC GGCATTTTCA 
GCGCAGGCGG CACAGGAACT GACTCCTGAG CAGGCAGAAT CCCTGCAACC CTTTGAGCGA 
ATTACGTTTA AAGGCCGTTT TAACGCAATC AATGAAGCGG TTGCCGCAGC ATCAAAACGC 
GCCGACAAGT TGGGAGCTGA CTCGTTCTAT GTGCAAGCGA TGGATGACGC CAATTCGAGT 
GGGAACTGGA ATGTCACTGT CGACCTGTAT CGTAAAGATG CGCCAAAGGC GAGTCAGGAA 
GCCCAATTCC GCACCTTTTA CGGCGTGAAA GAGCTGCCGA AAGATGTGGC CTATTCGCTG 
GAACCCTATG ATACGGTAAC TGTTGGTGGA TTCTTCCGCA GCCAACCGGA TGTGAATGAT 
GCGATTGCAA AAGCAGCAAA AGAGAAAAAT GCCGATTCGT TCTATATCGT CCGTCAGATT 
GATGTGAACT CGAATAGCGC TAACCAGAAA GTCACTGCCT ATATTTATAA AGCTGATGCA 
CCGAAGCGCC AGACCCAGAG CACAGACGTC ATCCCAGCTG ATTCTGATGC GGGTCGTGCA 
GCGCTAGCTG CTGGTGGTGC AGAAGCAGCC AAGGTGGAAA TTCCTGGTGT TGCTAACTCC 
GGCAGCCCTA GCCGTAACGT AGGTAATTTC TTCGAAACAC AGTCGTCAAA AGGTGGGCGT 
TACACGGTAA CGTTAGCAGA TGGTTCCAAG ATTCAGGAAC TGAATAACGC TACCGCAGCG 
CAGATGGTGC CCTTCGATTC GATTAAATTC CGCGGTAATT ATACTAGTAT GACGCAGGTG 
TCTGAAGCTG TTGCTAAACG TGCGGGCGAG AAAGGTGCCA AGTACTACCA CATAACCAGA 
CAGTGGGAAG GCAAAGGCAA CAACATGACG ATAAGCGCTG ATCTCTATAA ATAA
 
Protein sequence
MKLKTTVIAS TLLLSLSAFS AQAAQELTPE QAESLQPFER ITFKGRFNAI NEAVAAASKR 
ADKLGADSFY VQAMDDANSS GNWNVTVDLY RKDAPKASQE AQFRTFYGVK ELPKDVAYSL 
EPYDTVTVGG FFRSQPDVND AIAKAAKEKN ADSFYIVRQI DVNSNSANQK VTAYIYKADA 
PKRQTQSTDV IPADSDAGRA ALAAGGAEAA KVEIPGVANS GSPSRNVGNF FETQSSKGGR 
YTVTLADGSK IQELNNATAA QMVPFDSIKF RGNYTSMTQV SEAVAKRAGE KGAKYYHITR 
QWEGKGNNMT ISADLYK